Transcript Information: R_Transcript_250857.p1


Annotated TAIR IDAT1G43980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16687637-16689502 | Reverse length=621
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71115432291112
Replicate 20.54535845237138
Replicate 30.44623514797699
Condition 2: 8 Hour
Replicate 11.1129938612384
Replicate 20.43560159430881
Replicate 31.8858816228974
Condition 3: 24 Hour
Replicate 12.0870733843367
Replicate 21.0025117677535
Replicate 30.99489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_250857.p1 GENE.R_Transcript_250857~~R_Transcript_250857.p1 ORF type:3prime_partial len:154 (+),score=12.07,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.1,PPR|PF01535.16|0.00017,PPR|PF01535.16|15 R_Transcript_250857:75-533(+)
ATGGAGACTGGGTGTAGAGGCTTATATGAGAGAAGCAACCAAGCAAGAATAATATATGTTTGGCAATATAAGATAGAATTTTGTATGTTCCCTTTGTCGAAACAAATTCGTAGCATTTCTAGAACGCTTACTTTCTACTCTTATCTGATTGACCATTGCCTTACATCAAAGTCGCTGAATCTAACCAAAGTCATCCATGCCCAGTTGATAAAAGTTGGATTCCATAGGCATACTTTTCTTGGTAATCGATGTCTTGAACTTTATACCCAGTTTCAGTGCATTAATGATATCTTGAAAGCATTTTATGACGTGGCTAAGAAGAATAATATATCTTGGAATGTTTGCTTGAAAGGGCTGCTGAATTGTGGCCACCATGAGATGGCACAATGTCTGTTCCAGGAAATGCCGGAACGTGATGTTGTGAGTTGGAATTCTTTGATCTCATGGCATGCTTCTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_250857.p1 GENE.R_Transcript_250857~~R_Transcript_250857.p1 ORF type:3prime_partial len:154 (+),score=12.07,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|1.1,PPR|PF01535.16|0.00017,PPR|PF01535.16|15 R_Transcript_250857:75-533(+)
METGCRGLYERSNQARIIYVWQYKIEFCMFPLSKQIRSISRTLTFYSYLIDHCLTSKSLNLTKVIHAQLIKVGFHRHTFLGNRCLELYTQFQCINDILKAFYDVAKKNNISWNVCLKGLLNCGHHEMAQCLFQEMPERDVVSWNSLISWHASG

Click here to download the sequence:
Link to NCBI Protein BLAST