Transcript Information: R_Transcript_25094.p1


Annotated TAIR IDAT3G01150.1
Annotated Gene Namepolypyrimidine tract-binding protein 1
Annotated Gene Symbol(s)PTB, ATPTB1, PTB1
Annotation TypeOrtholog
Chromosome Positionchr3:51732-54344 | Forward length=399
E-Value1.1E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6055231515494
Replicate 20.45362377442619
Replicate 31.060497110933
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 20.34507533705533
Replicate 30.67228187482915
Condition 3: 24 Hour
Replicate 11.9840080320238
Replicate 20.40843072019588
Replicate 32.229303255147


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25094.p1 GENE.R_Transcript_25094~~R_Transcript_25094.p1 ORF type:complete len:324 (+),score=54.39,RRM_1|PF00076.18|3.1e-09,RRM_1|PF00076.18|0.00027,RRM_1|PF00076.18|0.0051,RRM_5|PF13893.2|2.4e-05,RRM_5|PF13893.2|4.5e+03,RRM_5|PF13893.2|0.016,RRM_5|PF13893.2|0.0049,RRM_6|PF14259.2|3.6e-07,RRM_6|PF14259.2|0.022,RRM_6|PF14259.2|0.22 R_Transcript_25094:289-1260(+)
ATGTCAACATCAGGGCAACAGCAATTCAGGTACACACAAACACCATCGAAGGTCCTTCATTTAAGGAACCTGCCTTGGGAGTGCTCTGAAGAGGAGCTTATCGAGCTTTGCAAACCCTTCGGTAAGATCGTTAACACCAAGTGCAATGTCGGCGCCAATCGTAATCAGGCCTTCGTCGAATTCGCAGATCTTAACCAGGCCATCTCAATGGTTTCATATTATGCCTCTTCTTCAGAGCCTGCGCAAGTTCGAGGGAAAACTGTGTACATTCAATATTCAAACAGACATGAAATTGTGAACAATAAGAGTCCTGGTGACACTCCCGGAAATGTCTTGTTGGTTACTATGGAGGATGTGCAACCTGGTGATGTAACCATTGAAGTTATTCACTTGGTTTTCTCTGCCTTTGGGTTTGTCCACAAAATTGCCACTTTTGAGAAGGCTGCTGGATTTCAGGCATTAATTCAATTCAGTGATGTAGAGACTGCAAGTGCAGCAAAGAATGCGTTGGATGGAAGAAGCATACCTAGGTATTTACTTCTGGAGCATGTGACTTCATGCCACCTGCGGATCTCATATTCTGCACATACTGACCTTAATATTAAGTTCCAATCTCACAGGAGCAGGGACTATACCAATCCATATCTTCCTGTGAACCCTACTGCATTTGAGGGTTTCGTCCAGCCTGTGCTAGGTACTGATGGGATAAAAAAGGAACAGGAGAGCAATGTGCTTCTTGCTGCAATTGAGAATATGCAATATGCAGTGACACCTGATGTCCTTCATACGGTATTTTCTGCATTTGGCACAGTGCAAAAAATTGCTATATTTGAGAAAAATGGCCAGACACAGGCGCTGATTCAGTATCCTGGAAAGAGAACCATCAAGCAGTTTCTGTTTGGCTTTCACTTGGAGCAAAATTTTACATGTTCGAAAAACTCTTTTAGTATTGACAGGAGGGGACAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25094.p1 GENE.R_Transcript_25094~~R_Transcript_25094.p1 ORF type:complete len:324 (+),score=54.39,RRM_1|PF00076.18|3.1e-09,RRM_1|PF00076.18|0.00027,RRM_1|PF00076.18|0.0051,RRM_5|PF13893.2|2.4e-05,RRM_5|PF13893.2|4.5e+03,RRM_5|PF13893.2|0.016,RRM_5|PF13893.2|0.0049,RRM_6|PF14259.2|3.6e-07,RRM_6|PF14259.2|0.022,RRM_6|PF14259.2|0.22 R_Transcript_25094:289-1260(+)
MSTSGQQQFRYTQTPSKVLHLRNLPWECSEEELIELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTMEDVQPGDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVETASAAKNALDGRSIPRYLLLEHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAFEGFVQPVLGTDGIKKEQESNVLLAAIENMQYAVTPDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGKRTIKQFLFGFHLEQNFTCSKNSFSIDRRGQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST