Transcript Information: R_Transcript_25097.p1


Annotated TAIR IDAT3G01150.1
Annotated Gene Namepolypyrimidine tract-binding protein 1
Annotated Gene Symbol(s)PTB, ATPTB1, PTB1
Annotation TypeOrtholog
Chromosome Positionchr3:51732-54344 | Forward length=399
E-Value1.6E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.616692163269
Replicate 219.669736773438
Replicate 320.26173303712
Condition 2: 8 Hour
Replicate 118.244369960692
Replicate 222.945480059256
Replicate 323.13440569265
Condition 3: 24 Hour
Replicate 119.306565555324
Replicate 218.307306399368
Replicate 318.358967983563


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25097.p1 GENE.R_Transcript_25097~~R_Transcript_25097.p1 ORF type:complete len:459 (+),score=80.28,RRM_1|PF00076.18|5.1e-09,RRM_1|PF00076.18|0.00046,RRM_1|PF00076.18|3.9e-06,RRM_5|PF13893.2|4.1e-05,RRM_5|PF13893.2|6.8e+03,RRM_5|PF13893.2|0.026,RRM_5|PF13893.2|2e-06,RRM_6|PF14259.2|6.3e-07,RRM_6|PF14259.2|0.036,RRM_6|PF14259.2|0.018 R_Transcript_25097:289-1665(+)
ATGTCAACATCAGGGCAACAGCAATTCAGGTACACACAAACACCATCGAAGGTCCTTCATTTAAGGAACCTGCCTTGGGAGTGCTCTGAAGAGGAGCTTATCGAGCTTTGCAAACCCTTCGGTAAGATCGTTAACACCAAGTGCAATGTCGGCGCCAATCGTAATCAGGCCTTCGTCGAATTCGCAGATCTTAACCAGGCCATCTCAATGGTTTCATATTATGCCTCTTCTTCAGAGCCTGCGCAAGTTCGAGGGAAAACTGTGTACATTCAATATTCAAACAGACATGAAATTGTGAACAATAAGAGTCCTGGTGACACTCCCGGAAATGTCTTGTTGGTTACTATGGAGGATGTGCAACCTGGTGATGTAACCATTGAAGTTATTCACTTGGTTTTCTCTGCCTTTGGGTTTGTCCACAAAATTGCCACTTTTGAGAAGGCTGCTGGATTTCAGGCATTAATTCAATTCAGTGATGTAGAGACTGCAAGTGCAGCAAAGAATGCGTTGGATGGAAGAAGCATACCTAGGTATTTACTTCTGGAGCATGTGACTTCATGCCACCTGCGGATCTCATATTCTGCACATACTGACCTTAATATTAAGTTCCAATCTCACAGGAGCAGGGACTATACCAATCCATATCTTCCTGTGAACCCTACTGCATTTGAGGGTTTCGTCCAGCCTGTGCTAGGTACTGATGGGATAAAAAAGGAACAGGAGAGCAATGTGCTTCTTGCTGCAATTGAGAATATGCAATATGCAGTGACACCTGATGTCCTTCATACGGTATTTTCTGCATTTGGCACAGTGCAAAAAATTGCTATATTTGAGAAAAATGGCCAGACACAGGCGCTGATCCAGTATCCTGATGTCACAACTGCTTCTGTTGCAAAAGATGCTTTGGAAGGACACAGCATATATGATGGTGGCTACTGTAAGCTTCATCTAACATACTCTCGTCATACTGATCTCAATGTAAAGGCTCACAGTGATAAAAGTAGAGATTACACAATTCCAGACTCTGGGATGCTGCCCGGGCAACAGACTTCAAGCTACTCAGCAGCTCCTGCAACGCCCTGGCAAAACCCTCCAGCGGCAGCAGGATATCTGCCAAGTGGATACGGTACTGCTGCTCCCATGGGTCCCCAGAATCAAGTTCCCTCATGGGACCCGTCTTTGCAGGCTGGACGGCAAACATTCGTCTCAGTCCCAAGCACATTTCCAGGCCAGACATTTGTACCGTCCCCAGGTGCTGCATATGTGTCTGCACCAATTTCACCAGCACAGGCAGTTTCCTCTCCTTTGGTACAGAGCAGCCATGTTCGCCCCCCTGGTGCTGCGTCACCTGCTGGTCAGGCTTCTTATTACCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25097.p1 GENE.R_Transcript_25097~~R_Transcript_25097.p1 ORF type:complete len:459 (+),score=80.28,RRM_1|PF00076.18|5.1e-09,RRM_1|PF00076.18|0.00046,RRM_1|PF00076.18|3.9e-06,RRM_5|PF13893.2|4.1e-05,RRM_5|PF13893.2|6.8e+03,RRM_5|PF13893.2|0.026,RRM_5|PF13893.2|2e-06,RRM_6|PF14259.2|6.3e-07,RRM_6|PF14259.2|0.036,RRM_6|PF14259.2|0.018 R_Transcript_25097:289-1665(+)
MSTSGQQQFRYTQTPSKVLHLRNLPWECSEEELIELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTMEDVQPGDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVETASAAKNALDGRSIPRYLLLEHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAFEGFVQPVLGTDGIKKEQESNVLLAAIENMQYAVTPDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTASVAKDALEGHSIYDGGYCKLHLTYSRHTDLNVKAHSDKSRDYTIPDSGMLPGQQTSSYSAAPATPWQNPPAAAGYLPSGYGTAAPMGPQNQVPSWDPSLQAGRQTFVSVPSTFPGQTFVPSPGAAYVSAPISPAQAVSSPLVQSSHVRPPGAASPAGQASYYR*

Click here to download the sequence:
Link to NCBI Protein BLAST