Transcript Information: R_Transcript_25170.p1


Annotated TAIR IDAT3G13130.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4223008-4223613 | Forward length=201
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14759806701929
Replicate 20.11318760332236
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.097852348357881
Condition 3: 24 Hour
Replicate 10
Replicate 20.41613696019957
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25170.p1 GENE.R_Transcript_25170~~R_Transcript_25170.p1 ORF type:5prime_partial len:371 (-),score=56.90 R_Transcript_25170:277-1389(-)
GGACAAGCGGGACTAGCAAGTTGGCCCGCGAAGGAGAGAATCGGGATCTTTTTAGCGGTGGATTTCGTAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAGCCTATTTCTCATGCTAACCAATTCTCATTCCAAAACAAGGCTTCAACTCTTGCATCCTCTCGTGTTTCCACATTTTAGGACCTATTTAATTTTCAAAATGGATGACTTCCATGATGAGCCCTTAAAGCTTGAAATTGATCCCTTGTTTCTCAAAAACCAAGCCACAAGAACAAGAACCAGCAAGTACCCCCACCTTCTCAGAAAGGCCTTGGTATTGCTCCTTCCGATGTCACTGCTCTCTCTTCTCCTTACCCTTTTCACTGGTGTCTCCTTTCTCCAGTCTTACGCCTACTACTTCTCCACGTTCCTCTTTCCACTCCTTACACAAGCATTGGAGAGAAAGTACATGTTCCTCCTCTGCAATGGAATCCTTGTGTTTCTAGCTGCTGGTAAATCTGGTTTTTGCAGTGCTGTTTTTTCTTCTCCTCCTCCTCCTTCAAGGCTTCAGGGAGAAGCTGAAACTAACCATGTGCAAGGTGAAATCACGATAAAGTATGATGAAGCATCCCATACAATGTTGCAGCCATCAGCAGTGCCTGTTAATTCTCTGTATGAAGAAGAAACAGAAACATGTGTCCAGACCGTTGGCTCTCCATACATAGTTTCATCGGCAATGTCAGAGCTAGAGAAAGAACACCTTCAAGCAAAACAACAGCAAGAAGAAGAAGAAGCAGATGTTTACAACATACCTTCGACAATAGAAGGCTCAGAAAAAGGAGCTCAAACAGCAGAAGTGATAGAAGATCAAGAAGGGGAATTAGACGAAAACGAGAACGAGTCAATTGGAGTCAGCAGAGGAGATAACGATACAGAGAGCGAAGGTCCTAATATAAACAGAATGCTGGAGAAGACTCGCCGCAATTGGGTAGGAGCTGCACTACAAACTGCAGACACTGCTGTCTTGGAGAAGAAGATTGAACTCATAATGCCTTCAGGGAAGACACTCTATCTTCTCTGCTTGCCCACAAGAACAGCCAATATAAGCCCTCCTGATGGAGAAGGAACTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25170.p1 GENE.R_Transcript_25170~~R_Transcript_25170.p1 ORF type:5prime_partial len:371 (-),score=56.90 R_Transcript_25170:277-1389(-)
GQAGLASWPAKERIGIFLAVDFVNKIKKKKKKKSLFLMLTNSHSKTRLQLLHPLVFPHFRTYLIFKMDDFHDEPLKLEIDPLFLKNQATRTRTSKYPHLLRKALVLLLPMSLLSLLLTLFTGVSFLQSYAYYFSTFLFPLLTQALERKYMFLLCNGILVFLAAGKSGFCSAVFSSPPPPSRLQGEAETNHVQGEITIKYDEASHTMLQPSAVPVNSLYEEETETCVQTVGSPYIVSSAMSELEKEHLQAKQQQEEEEADVYNIPSTIEGSEKGAQTAEVIEDQEGELDENENESIGVSRGDNDTESEGPNINRMLEKTRRNWVGAALQTADTAVLEKKIELIMPSGKTLYLLCLPTRTANISPPDGEGTL*

Click here to download the sequence:
Link to NCBI Protein BLAST