Transcript Information: R_Transcript_251947.p1


Annotated TAIR IDAT5G67380.1
Annotated Gene Namecasein kinase alpha 1
Annotated Gene Symbol(s)CKA1, ATCKA1
Annotation TypeOrtholog
Chromosome Positionchr5:26881156-26883383 | Reverse length=409
E-Value6.1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49780802603778
Replicate 20.19087545832998
Replicate 30.83297227622373
Condition 2: 8 Hour
Replicate 10.22259877224768
Replicate 21.2196844640647
Replicate 31.1551024940246
Condition 3: 24 Hour
Replicate 11.252244030602
Replicate 21.0025117677535
Replicate 31.1938748011035


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_251947.p1 GENE.R_Transcript_251947~~R_Transcript_251947.p1 ORF type:5prime_partial len:110 (+),score=0.04 R_Transcript_251947:2-331(+)
ATTTCCCCAGAGGCTATTGATTTTCTTGATAAGCTCCTTCGCTATGATCATCAGGATAGGCTTACAGCAAAAGAAGCAATGGTAATTTTGCACAAGAGTCTGCACAGATGTATCATCTTGTGGCTTTTACTCTATGTGCATGTGAATGCGGCATGCTTGTCATATTTCTGTTATGTATTTGTCAATAAGAAAGTTGTCATTTGTAGGCTATCTTTTATGATATGTGTACTCAGATCTATTAGGATATCCCTAGCACATTTTTGTCAGATTTGTATACTTGGATCTTTTTGTATGCGTTGGTCTTTCTACGCATTTTCGTTGCATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_251947.p1 GENE.R_Transcript_251947~~R_Transcript_251947.p1 ORF type:5prime_partial len:110 (+),score=0.04 R_Transcript_251947:2-331(+)
ISPEAIDFLDKLLRYDHQDRLTAKEAMVILHKSLHRCIILWLLLYVHVNAACLSYFCYVFVNKKVVICRLSFMICVLRSIRISLAHFCQICILGSFCMRWSFYAFSLHI*

Click here to download the sequence:
Link to NCBI Protein BLAST