Transcript Information: R_Transcript_252.p1


Annotated TAIR IDAT5G01990.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:377373-379600 | Reverse length=431
E-Value1.3E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.53443485508
Replicate 28.1404096176664
Replicate 311.75121053987
Condition 2: 8 Hour
Replicate 18.9144756545526
Replicate 211.471185247133
Replicate 311.97233891983
Condition 3: 24 Hour
Replicate 115.413752370373
Replicate 213.817124364073
Replicate 313.039483643258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_252.p1 GENE.R_Transcript_252~~R_Transcript_252.p1 ORF type:complete len:423 (+),score=63.35,Mem_trans|PF03547.14|1.2e-71 R_Transcript_252:410-1678(+)
ATGAGTATGAGGATGGAGAGATTACTGACACAAGTTCTGATGGCGGTGGAAGAAGTAGGAGTAGGAGGAGGAGGACAGTCTTTGCTTTCGACCATTAAAATCGCGATTCTTCCCATCGCTAAGGTCTTTACTATGTGCTTTCTGGGGTTCCTCATGGCTACCAAATATGTTAACATTCTTCCTGCTAATGGTCGCAAACTCCTCAATGGGTTGGTTTTTACTCTGCTGCTCCCTTGTTTGATTTTCTCCCAACTAGGCCAATCTATCACTCTCCAGAAAATGCTTGAATGGTGGTTTATTCCTTTCAATGTTGTTCTTGCAACTATTTCAGGCTCCCTTATTGGCCTACTCGTTGCAATGCTTGTCCGCCCTCCTTACCCCTTCTTCAAATTCACCATCATTCATATTGGCATTGGAAACATTGGAAATGTGCCACTTGTTTTGATTGCAGCTCTGTGTAGAGATAAAAATAATCCTTTCGGGTCATCAGACAAGTGCAGTCAAGATGGAACAGCCTACATTTCATTCGGACAATGGGTGGGTGCAATTGTCTTATATACATACGTATTTCAAATGCTGGCGCCTCCTCCTGAAGGCACCTTCGATGTGGAAGGTGGACATCTTCCTATCAAAAGCAATCCACAAAATGGAAGTGCGTCTACTATGCAAACTCCCTTGCTTTCTCAAGATCCAGAGCCAGAAGAATCTAATGTTCCAAGCAGAGGAAAGTTCAAGGAGTTTTTGGTGTTCATATACGACAAGTTGAAGCTCAAACAGATCATACAGCCTCCCATCATTGCTTCAATATTGGCTATGTTATTTGGTTGTGTGCCTTTCTTCAAGAGGTTGATCTTTACTAGTGATGCTCCATTATTCTTCTTCACTGACAGCTGCATGATTCTTGGGGAGGCTATGATTCCTTGCATTTTGTTGGCATTAGGAGGCAACCTTATAGATGGGCCTGGAAGTTCGAAACTGGGTTTCCGGACAACTGCTGCAATTATTATCGGGCGGTTGGTTCTGGTCCCTCCTATGGGTCTTGGGATAGTTACGTTGGCTGATAAATTGGGTTTCCTTCCCCCTGGTGATAAGATGTTCAAATTTGTTCTGCTGCTCCAGCACACGATGCCTACATCTGTGCTTTCAGGTGCTGTCGCCAATTTAAGAGGTTGTGGGAGGGAATCTGCCGCGATCCTATTCTGGGTTCATGTCTTTGCAGTTTTCTCCATGGCTGCGTGGATTGTGTTGTACATCAACATACTCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_252.p1 GENE.R_Transcript_252~~R_Transcript_252.p1 ORF type:complete len:423 (+),score=63.35,Mem_trans|PF03547.14|1.2e-71 R_Transcript_252:410-1678(+)
MSMRMERLLTQVLMAVEEVGVGGGGQSLLSTIKIAILPIAKVFTMCFLGFLMATKYVNILPANGRKLLNGLVFTLLLPCLIFSQLGQSITLQKMLEWWFIPFNVVLATISGSLIGLLVAMLVRPPYPFFKFTIIHIGIGNIGNVPLVLIAALCRDKNNPFGSSDKCSQDGTAYISFGQWVGAIVLYTYVFQMLAPPPEGTFDVEGGHLPIKSNPQNGSASTMQTPLLSQDPEPEESNVPSRGKFKEFLVFIYDKLKLKQIIQPPIIASILAMLFGCVPFFKRLIFTSDAPLFFFTDSCMILGEAMIPCILLALGGNLIDGPGSSKLGFRTTAAIIIGRLVLVPPMGLGIVTLADKLGFLPPGDKMFKFVLLLQHTMPTSVLSGAVANLRGCGRESAAILFWVHVFAVFSMAAWIVLYINILF*

Click here to download the sequence:
Link to NCBI Protein BLAST