Transcript Information: R_Transcript_25222.p1


Annotated TAIR IDAT4G11260.1
Annotated Gene Namephosphatase-related
Annotated Gene Symbol(s)ATSGT1B, ETA3, RPR1, EDM1, SGT1B
Annotation TypeOrtholog
Chromosome Positionchr4:6851515-6853719 | Reverse length=358
E-Value4.1E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1132.95789521172
Replicate 2124.2328016589
Replicate 3128.22860080634
Condition 2: 8 Hour
Replicate 1115.86474968334
Replicate 2144.41652642203
Replicate 3156.40556711508
Condition 3: 24 Hour
Replicate 1159.4121198921
Replicate 2142.5018067729
Replicate 3136.60744372948


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25222.p1 GENE.R_Transcript_25222~~R_Transcript_25222.p1 ORF type:complete len:373 (+),score=91.45,SGS|PF05002.11|5.7e-36,CS|PF04969.12|3.8e-17,TPR_11|PF13414.2|9.4e-12,TPR_11|PF13414.2|0.22,TPR_1|PF00515.24|0.016,TPR_1|PF00515.24|0.0018,TPR_1|PF00515.24|0.00085,TPR_2|PF07719.13|0.038,TPR_2|PF07719.13|0.011,TPR_2|PF07719.13|0.0054,TPR_19|PF14559.2|7.8e-05,TPR_19|PF14559.2|0.15,TPR_8|PF13181.2|1.2,TPR_8|PF13181.2|0.81,TPR_8|PF13181.2|0.2,TPR_16|PF13432.2|0.0002,TPR_16|PF13432.2|0.00074,TPR_16|PF13432.2|1.6e+04,TPR_14|PF13428.2|0.37,TPR_14|PF13428.2|0.094,TPR_14|PF13428.2|1.2 R_Transcript_25222:221-1339(+)
ATGGCGACGGATCTAGAGAAGAAGGCAAAGGAAGCATTCATCGACGACCACTTCGAATTGGCCGTCGAACTTTACTCTCAGGCCATCGATTTGAACCCTAACAACGCCGAACTTTATGCCGACCGTGCTCAGGCCAATATCAAGCTTTCTAACTTCACCGAGGCTGTTGCCGATGCTAACAGAGCGATTGAGCTGGATTCTTCAATGGCCAAGGCCTACCTGCGGAAAGGCACTGCGTGTATGAAGCTTGAGGAATATCAAACTGCAAAGACAGCCTTCCAATCAGGGGCTTCTTTAGCACCTGGGGATTCAAGATTCACAAATTTTATCAAGGAATGTGATGAGCGCATTGCAGAGGAAAATGCCAGTTTTGTGAAACCATCAGTTGCACAACCAACAACTCAAACTACTGTGCCTGCAGTATCAAATGGAAATGCTACCACTTCACCAGCTACCGATGCCCCTGCAGCCAATGGTCTGTATAGTGAGGCTAGTGCGGTGACTCAGCTGAAACCAAAATTCAGGCATGAATTCTATCAGAAGCCAGATGTAGTGGTCATAACTATTTTTGCCAAGGGTATACCTGCCAAAAGTGTTGCTGTTGATTATGGAGAACAAATTCTTAGTGTTACCATTGATATTCCTGGTGAGGAGCCATATCACCTTCAACCTCGCTTATTTGGGAAGATAATACCAGCCCAGTGCAGGTATGAGGTCATGTCCACCAAAATTGAAATTCGCCTTGCAAAAGCTGAGCAAATACAGTGGACTTCTCTGGAATACACCAAAGAGGTTGCAGTTCCACAGAAAATTAATGTTTCATCCAATGTACCGAGACCGACCTATCCATCCTCTAAGCATAGAGGAATAGACTGGGACAAATTGGAAGCTCAAGTAAAGAAGGAGGAGAAGGATGAAAAACTAGACGGTGATGCAGCTTTGAACAAGTTCTTCCGGGACATTTACAGAGATGCTGATGAGGATACCAGAAGAGCCATGCAAAAATCCTTTGTTGAGTCAAATGGAACAGTCCTGTCAACAAACTGGAAAGAAGTGGGCTTAAAGAAGGTTGAGGGAACCCCTCCTGATGGCATGGAGATGAAGAAATGGGAATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25222.p1 GENE.R_Transcript_25222~~R_Transcript_25222.p1 ORF type:complete len:373 (+),score=91.45,SGS|PF05002.11|5.7e-36,CS|PF04969.12|3.8e-17,TPR_11|PF13414.2|9.4e-12,TPR_11|PF13414.2|0.22,TPR_1|PF00515.24|0.016,TPR_1|PF00515.24|0.0018,TPR_1|PF00515.24|0.00085,TPR_2|PF07719.13|0.038,TPR_2|PF07719.13|0.011,TPR_2|PF07719.13|0.0054,TPR_19|PF14559.2|7.8e-05,TPR_19|PF14559.2|0.15,TPR_8|PF13181.2|1.2,TPR_8|PF13181.2|0.81,TPR_8|PF13181.2|0.2,TPR_16|PF13432.2|0.0002,TPR_16|PF13432.2|0.00074,TPR_16|PF13432.2|1.6e+04,TPR_14|PF13428.2|0.37,TPR_14|PF13428.2|0.094,TPR_14|PF13428.2|1.2 R_Transcript_25222:221-1339(+)
MATDLEKKAKEAFIDDHFELAVELYSQAIDLNPNNAELYADRAQANIKLSNFTEAVADANRAIELDSSMAKAYLRKGTACMKLEEYQTAKTAFQSGASLAPGDSRFTNFIKECDERIAEENASFVKPSVAQPTTQTTVPAVSNGNATTSPATDAPAANGLYSEASAVTQLKPKFRHEFYQKPDVVVITIFAKGIPAKSVAVDYGEQILSVTIDIPGEEPYHLQPRLFGKIIPAQCRYEVMSTKIEIRLAKAEQIQWTSLEYTKEVAVPQKINVSSNVPRPTYPSSKHRGIDWDKLEAQVKKEEKDEKLDGDAALNKFFRDIYRDADEDTRRAMQKSFVESNGTVLSTNWKEVGLKKVEGTPPDGMEMKKWEY*

Click here to download the sequence:
Link to NCBI Protein BLAST