Transcript Information: R_Transcript_252742.p1


Annotated TAIR IDAT5G45520.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18449509-18453012 | Reverse length=1167
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6275855501035
Replicate 21.5717000311624
Replicate 32.6819788740217
Condition 2: 8 Hour
Replicate 11.7859172130428
Replicate 22.6180686992559
Replicate 33.3794745300912
Condition 3: 24 Hour
Replicate 12.5116986794225
Replicate 22.9209459951052
Replicate 33.0247883636403


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_252742.p1 GENE.R_Transcript_252742~~R_Transcript_252742.p1 ORF type:complete len:521 (+),score=95.55 R_Transcript_252742:100-1662(+)
ATGTCGGCCTCCCCTGTAGCAGCTTCTACTTCCCCTGATCTTTCCCTCCTTCTCGGTTATGCTTCAAGACTTGAAGGTCTGCTGGACGCCACCAAATCCAGATCAGTTGAAGGTTCCAACATTCTGGTTGAAGAAGCCATCAAAGGGGTACTGGAAGTTTTGAATAATGTAGGCCAAGTACAGGGCCATTTGATAGAGGAGTCTGTAGCTCATGTCAAGAGTAAACTGAAAGAAAAACTTGAAGAATTCATCAAGGTTGACCCTGATAATGAAGCTTATTATAAGGGACTTGCTCAGCGCCTTGAATCCCACCAGAAACATCAGTCATCAGCCTCAGGGAGCAACTCCTCTTTTGTTAAGAATGAGGCTTCAGGTTCCGACATTCTTCAGGAACTCAATGATATCGAGGAAAAATTTGGAAACCTTACTGAAGATGAGATTCAATGCCTGTTTTGTTTCGGTTTGTTCCCTCAAGGGTGTGAGATAGAGAAGACAGTACTTGTCTATTGGTGGGTGGCCTTGGATTTAATTGATCTTGCAGGGACAGATGAATTACTTGCCACTCTCACCAAGGAGGGTTTCATCCAGCGCACTGTAAAAAACCACAAACTGACAAATAGCTATAGGATGCCTGCTGGTATCCACGAGCTGGTCATTGAGCAAGCAGTGACCGAATCTTGGTCTCCTAAGGCAGCTGTTTTGCAAAAAGACGGCATCTTATCTACAGACAACAAAAAACTAAATCCAGATAAGGTTGAATTACTGCTCAATGTAGGCAAGCATACCCTTGATGCTACCTCTACAACAGTCGAGTGGTTCAATGGGATGAAGAATGTTAAAGTGGCACATTTAGGGAGTTGGCATCAGGATACAGAATACTATATAGTGCTTGAAGACCCTAATTTCTTGAAAATTCTCAAGCAGATGGGGCACCTCAGGCTATTAAGCCTTCAAGGTGTGTCAGGAATAGTTGAGCTACCAGATTTAGTCTACGAGCTTGGTAACCTGAGGGTCTTGGATCTGAGGGCATGTCACAACTTGGAGGTTCTTCCCAAAGGGATTGAATCGCTGCAACAACTTACGCACTTGGACTTGTCAGAGTGCTACCTGCTTGATCACATCCCAAAGGGAATTGCTTCCCTTTCCGGGCTTAGAGTGCTTAAGGGCTTCATTGTCAGTACACAGAATGATTCATCGTCGTGTGCATTCAGCCTGTTATCAGCATTGCGGCAGCTCATAAAGCTTACAATTCGTAGTAGAAGAATGAATTTCCCAACAGAGAATGATGTACGGACTATACGAGAAATGAGCAGCCTTAGAAAGCTCAGAATTGGATGGACGGGAAGTATCAGTGATGCTCCAACTTTCAGGGACCTGAAAACTTTTCCAGAGAACTTAGAGAAACTGGAGCTACGAGCTGCCCCTAAGACAACAGCTTCACAACTACTGCGGCTGATAAGAGAGCAGCACAATTGTCTCCGCAAAATCTATATTATAGGAGGAGAGTTCGATGATCTGGGTTCAGCAGCATTGCTTCCCTGGAATCACAAATGTACGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_252742.p1 GENE.R_Transcript_252742~~R_Transcript_252742.p1 ORF type:complete len:521 (+),score=95.55 R_Transcript_252742:100-1662(+)
MSASPVAASTSPDLSLLLGYASRLEGLLDATKSRSVEGSNILVEEAIKGVLEVLNNVGQVQGHLIEESVAHVKSKLKEKLEEFIKVDPDNEAYYKGLAQRLESHQKHQSSASGSNSSFVKNEASGSDILQELNDIEEKFGNLTEDEIQCLFCFGLFPQGCEIEKTVLVYWWVALDLIDLAGTDELLATLTKEGFIQRTVKNHKLTNSYRMPAGIHELVIEQAVTESWSPKAAVLQKDGILSTDNKKLNPDKVELLLNVGKHTLDATSTTVEWFNGMKNVKVAHLGSWHQDTEYYIVLEDPNFLKILKQMGHLRLLSLQGVSGIVELPDLVYELGNLRVLDLRACHNLEVLPKGIESLQQLTHLDLSECYLLDHIPKGIASLSGLRVLKGFIVSTQNDSSSCAFSLLSALRQLIKLTIRSRRMNFPTENDVRTIREMSSLRKLRIGWTGSISDAPTFRDLKTFPENLEKLELRAAPKTTASQLLRLIREQHNCLRKIYIIGGEFDDLGSAALLPWNHKCTS*

Click here to download the sequence:
Link to NCBI Protein BLAST