Transcript Information: R_Transcript_252834.p1


Annotated TAIR IDAT3G17440.1
Annotated Gene Namenovel plant snare 13
Annotated Gene Symbol(s)NPSN13, ATNPSN13
Annotation TypeOrtholog
Chromosome Positionchr3:5969909-5972290 | Reverse length=269
E-Value3.7E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.977400605685
Replicate 231.688143432715
Replicate 334.740476575715
Condition 2: 8 Hour
Replicate 125.479756144366
Replicate 228.384292816855
Replicate 329.605209941738
Condition 3: 24 Hour
Replicate 129.311443914338
Replicate 229.135729456925
Replicate 330.368180672596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_252834.p1 GENE.R_Transcript_252834~~R_Transcript_252834.p1 ORF type:complete len:271 (+),score=68.49,Sec20|PF03908.9|2.4e+02,Sec20|PF03908.9|5.4e-07,V-SNARE_C|PF12352.4|2e+03,V-SNARE_C|PF12352.4|1e+04,V-SNARE_C|PF12352.4|2.8e-07 R_Transcript_252834:515-1327(+)
ATGGCGACCGATTTGCCTATGAATCCTCAGATGGAGCAGATCCACGGTGAAATTCGCGATAATTTTCGAGCTCTTGCCAATGGGTTCCAGAAGCTGGACAAGATCAAAGATCCAAATAGGCAAAGTAAGCAGCTGGAAGAACTTACAGGGAAAATGAGGGAATGTAAAAGATTGATCAAGGAGTTTGATCGGGAAATTAAGGATGAGGAGGCCAGAAACTCCCCTGAAATCAATAAGCAACTCAATGATGAGAAGCAATCCATGATCAAAGAGCTAAATTCATACGTGGGCTTAAGGAAGACATATATGAGTAGCCTTGGTAATAAGAAGGTGGAGTTGTTTGACATGGGAGCAGGAACCAGTGAACCAACTGCTGAAGAAAACGTTCAGATGGCATCATCTATGACAAACCAAGAGCTTGTTGATGCTGGCCATAAGACATTGGATGAGACTGATCAGGCTATTGAACGGTCTAAACAGGTTGTTACACAAACTATTGAAGTGGGAACTCAAACCGCAGCCAATTTAAAAGGCCAAACTGAGCAAATGGGCCGCATTGTTAATGAGTTGGATACTATTCAATTTTCACTCAAGAAGGCCTCTCAACTGGTGAAGGAGATTGGTCGGCAGGTTGCCACTGACAAATGTATCATGCTTTTTCTTTTTCTCATTGTTGCTGGCGTCATAGCAATAATTGTGGTGAAGATTGTGCATCCAAACAACAAAGACATTAGGGACATCCCCGGGTTGGCCCCGCCAGCCCCTTCAGCGAGGAGGCTGTTGTATGTGAGAGATGCCAAACATTATGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_252834.p1 GENE.R_Transcript_252834~~R_Transcript_252834.p1 ORF type:complete len:271 (+),score=68.49,Sec20|PF03908.9|2.4e+02,Sec20|PF03908.9|5.4e-07,V-SNARE_C|PF12352.4|2e+03,V-SNARE_C|PF12352.4|1e+04,V-SNARE_C|PF12352.4|2.8e-07 R_Transcript_252834:515-1327(+)
MATDLPMNPQMEQIHGEIRDNFRALANGFQKLDKIKDPNRQSKQLEELTGKMRECKRLIKEFDREIKDEEARNSPEINKQLNDEKQSMIKELNSYVGLRKTYMSSLGNKKVELFDMGAGTSEPTAEENVQMASSMTNQELVDAGHKTLDETDQAIERSKQVVTQTIEVGTQTAANLKGQTEQMGRIVNELDTIQFSLKKASQLVKEIGRQVATDKCIMLFLFLIVAGVIAIIVVKIVHPNNKDIRDIPGLAPPAPSARRLLYVRDAKHYG*

Click here to download the sequence:
Link to NCBI Protein BLAST