Transcript Information: R_Transcript_25286.p1


Annotated TAIR IDAT5G20100.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6790153-6790494 | Forward length=113
E-Value2.7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.348304159444
Replicate 217.344769909116
Replicate 315.935121806019
Condition 2: 8 Hour
Replicate 112.562313320761
Replicate 214.388741358676
Replicate 315.152648865714
Condition 3: 24 Hour
Replicate 112.776518804983
Replicate 28.4385338363948
Replicate 312.942294945296


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25286.p1 GENE.R_Transcript_25286~~R_Transcript_25286.p1 ORF type:complete len:115 (+),score=21.30,DUF4666|PF15697.1|4.4e-29 R_Transcript_25286:334-678(+)
ATGGCAGGATTACAAAGGTCAGCAATATCATTTAGAAGGCAGGGATCCTCTGGTTTGGTGTGGGATGACAAGCTGGTATCAGGAGAACTTAATCCTGAACATGAGAAATCAGGAGAAATCATATCATCATCATCAACAGATCATAAGGCTGAATTGAGACGCACCAAATCGGACGGTGGAGGAAGGCGGAGTACCTACCGTACTGTCAAAGTCGAGCAAGCAGAGGATCCCCCCTCCCCTAGGCTCTCTGCCTGTGGTTTTTGTAGTGTTTTTGCCAAGTCTTCTTCTGCCCGCCGTCGCTCTGATGTAAGAAAATCTGGTAAGCGTAACGCTAAAGCTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25286.p1 GENE.R_Transcript_25286~~R_Transcript_25286.p1 ORF type:complete len:115 (+),score=21.30,DUF4666|PF15697.1|4.4e-29 R_Transcript_25286:334-678(+)
MAGLQRSAISFRRQGSSGLVWDDKLVSGELNPEHEKSGEIISSSSTDHKAELRRTKSDGGGRRSTYRTVKVEQAEDPPSPRLSACGFCSVFAKSSSARRRSDVRKSGKRNAKAL*

Click here to download the sequence:
Link to NCBI Protein BLAST