Transcript Information: R_Transcript_253092.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value3E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1567364894401
Replicate 23.8518392850043
Replicate 34.4083110122092
Condition 2: 8 Hour
Replicate 14.9764437752495
Replicate 24.8663070193947
Replicate 36.8558241551821
Condition 3: 24 Hour
Replicate 16.028488948282
Replicate 23.8081022544882
Replicate 35.8655899250858


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253092.p1 GENE.R_Transcript_253092~~R_Transcript_253092.p1 ORF type:complete len:556 (-),score=97.98 R_Transcript_253092:284-1951(-)
ATGCCTATCCATTTGCACAATAATGTTAGCATTGTTTTTCATTTTTATGCCGTCCAGGTCAAGCACCATGAGCAATCATATGAATTGTGGCTCTTGTACATCAACAGTCGTAGAAGACTAAATGATCGCTTGGCTGCTTACGAAAGGGCAATTTCCCGCTTGTGCCACCATGCATCCCACATTGATGGAAACATGATGCATCACAGTGCTGCCATCTTGGACCTGTTTCTGCAGATGATGCATTGTTTGTGCATGTCAGGAAATGTTCCAAAGGCAGTCCAGAGAATCTGTGGACTCGTTCTCGCTGATAGAGATTGCGATGAGTCTCATTCTCTCTTGCTTTCTGATATTCTTCAATGCTTAACGATATCTGACAAATGTATCTTCTGGGTTTGTTGTGTGTACTTAGTGATCTACAGGAAACTGCCTGATACAATGGTGCAGCAGTTTGAATTTGAGAAAGATATGTCTATAATGGAGTGGCCCTCTGTCCATTTAACACTTGAAAAAAAGCAGCAAGTGTCCAAGCTGATGGAAATGGCTATAGATTCTGTTGGATTGCATATCGACAACAAATCCCATGAGGATGAAGGTATTACTGCCAAATCAGCTTACCTGATTGCAGTGAACCACATTAAGCTTATGGCAGCCATAGATGGTGAAGAAAGCTATACAAAGTTTCTTGAGAAATATAAGAACTTGTATCCATCTTGTTTAGAACTTGTTCTATTGTCAGCAAGAGCTCATTGTGTCGGTGAAAGTGCAAATTTTGAAGGGTTTGAAGCAGCTATAAGTAATTGGTCAAAAGAGGTTCCTGGGATTCAGTGCATCTGGAACCAATTTGTGGAATATGTATTGGAGAATGGAAAACCCTGTCAGGCAAAAGAAATATTGGATAAGTGGTTTAACTTAGTGTGGAAGCGTCAATTTCATCACAACCAGTTGATTGATGGCAAGCATGAAGACATCAAGAGCAGTCCTGTAGATCTGTCTGGGTCGGATTTTAATGCTCTGCTTTCATCATCTAACAAAATTGATGCTGTTTTTGCACTGCTCAACCTCTCTCTATATAAAATGTTCCATGATGACCCATTTGAAGCTCAGTTGGCAATTGACAAAGCTCTGAGAGTTGCTGATCCTGATGTATTCAGATATTGTGTCAGGGAGCATGCTGTGTTTTTGTTCAACAATTCATCTCAGTTGAGAAAGGACATCTCTGTTCATGGGTTGCTGGACATTCTAAAGGCTTATATGAGTCACGCATGGGCTATTCCTGCTCGAGATCCATTGACCAGAATGTTCGTTAAGGACATCCAAAAGCCGAGATTGAGGCAGCTTGTGATTAACATCTTAAATCCGATTTCAACTGATACTTGCCTGGTCAATTCATTTCTTGATGTCTGGTTTGGCTCATCCTTCTTGCTTCAAAAGTCGATTGAGCTAAAAGATTTAGTGGACTTTGTGGAAGCGATTCTGGAAGTCTCACCTGCCAACTATCAGCTTGTGATCTCCGTCTGTAGGTTTCTCTGCCAAGACACTGTTGCCTGCAATACTAAATCAGCCAGTGTCTTGTTCTGGGCAAGCTCATCACTGGTTAACACACTCTATCATGCTGTCCCCGTTCCTCCAGAGTACGTATGGACAGAAGCACTAACTGGGACTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253092.p1 GENE.R_Transcript_253092~~R_Transcript_253092.p1 ORF type:complete len:556 (-),score=97.98 R_Transcript_253092:284-1951(-)
MPIHLHNNVSIVFHFYAVQVKHHEQSYELWLLYINSRRRLNDRLAAYERAISRLCHHASHIDGNMMHHSAAILDLFLQMMHCLCMSGNVPKAVQRICGLVLADRDCDESHSLLLSDILQCLTISDKCIFWVCCVYLVIYRKLPDTMVQQFEFEKDMSIMEWPSVHLTLEKKQQVSKLMEMAIDSVGLHIDNKSHEDEGITAKSAYLIAVNHIKLMAAIDGEESYTKFLEKYKNLYPSCLELVLLSARAHCVGESANFEGFEAAISNWSKEVPGIQCIWNQFVEYVLENGKPCQAKEILDKWFNLVWKRQFHHNQLIDGKHEDIKSSPVDLSGSDFNALLSSSNKIDAVFALLNLSLYKMFHDDPFEAQLAIDKALRVADPDVFRYCVREHAVFLFNNSSQLRKDISVHGLLDILKAYMSHAWAIPARDPLTRMFVKDIQKPRLRQLVINILNPISTDTCLVNSFLDVWFGSSFLLQKSIELKDLVDFVEAILEVSPANYQLVISVCRFLCQDTVACNTKSASVLFWASSSLVNTLYHAVPVPPEYVWTEALTGTV*

Click here to download the sequence:
Link to NCBI Protein BLAST