Transcript Information: R_Transcript_253434.p1


Annotated TAIR IDAT2G15630.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:6814521-6816404 | Forward length=627
E-Value7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55312002893087
Replicate 20.15906288194165
Replicate 30
Condition 2: 8 Hour
Replicate 11.1129938612384
Replicate 20.50820186002695
Replicate 30.4125366050088
Condition 3: 24 Hour
Replicate 10.34784556405612
Replicate 21.0025117677535
Replicate 30.66326377839083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253434.p1 GENE.R_Transcript_253434~~R_Transcript_253434.p1 ORF type:internal len:132 (-),score=23.66,PPR_2|PF13041.2|5.2e-15,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|5.3e-13,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|2.2e-16,PPR_1|PF12854.3|8e-05,PPR_1|PF12854.3|2.4e-07,PPR|PF01535.16|0.00017,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.0015,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|7e-06,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|1.5 R_Transcript_253434:3-395(-)
AAGAAGGGAATACAACCAACATTGACGACGTATAATATGCTGATACATTCATTGTTTATGGAGAACAAGGAAGCTATGGCTGATAGCTTGATAAAGGAAATGGAGGAGAAGGGTATGAAGCCAGACAATTTTACCTATAACATTCTTATTAACGGGTACTGCCAAAGTGGAAACGCAAACAAGGCATTTGAGCTTCTTGATGAGATGTTAACCAATTGTGTGCAGCCTACAAAGGTTACTTACACATCTCTTATTCATGTGTTGAGTAGAACTAAGAGAATGAATGAAGCACCTGATCTATTTGAGAAGGCAAAGCGGAATGGTGTAACTCCTGACCTTGTGATGTTCAATGCCCTTATAAACGGTTATTGTGCCTGTGGGAACGTTGAGCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253434.p1 GENE.R_Transcript_253434~~R_Transcript_253434.p1 ORF type:internal len:132 (-),score=23.66,PPR_2|PF13041.2|5.2e-15,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|5.3e-13,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|2.2e-16,PPR_1|PF12854.3|8e-05,PPR_1|PF12854.3|2.4e-07,PPR|PF01535.16|0.00017,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.0015,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|7e-06,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|1.5 R_Transcript_253434:3-395(-)
KKGIQPTLTTYNMLIHSLFMENKEAMADSLIKEMEEKGMKPDNFTYNILINGYCQSGNANKAFELLDEMLTNCVQPTKVTYTSLIHVLSRTKRMNEAPDLFEKAKRNGVTPDLVMFNALINGYCACGNVER

Click here to download the sequence:
Link to NCBI Protein BLAST