Transcript Information: R_Transcript_253438.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4316047807623
Replicate 21.3723072167515
Replicate 31.4971723919054
Condition 2: 8 Hour
Replicate 11.2803066639083
Replicate 20.73074777258776
Replicate 30.94910382328821
Condition 3: 24 Hour
Replicate 11.0503571934244
Replicate 21.0090641322486
Replicate 31.4305689337841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253438.p1 GENE.R_Transcript_253438~~R_Transcript_253438.p1 ORF type:complete len:153 (+),score=18.20,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|4.4e-15 R_Transcript_253438:1091-1549(+)
ATGAGATGGAACCAGGCAGCTACTCGCAAACTCTTCTGGGAATTTACACAGAAAAAAGATAGGATGATGTGGATTAAATGGTTACATGGCCATTACCTTGGCCTAACTAAGAATAGAAGGATTCCTACTCAACTATCTTGGATGCTAAGGAAGATAGTTGAAGCTAGAGATATGATGAATGGTTTTATGAGCACTTGTCAGAGGGATCAAGTCAAGATCAACAATATATACCAACAGCTGAGTGAAGATTTACCTAAAGTGGAGTGGTATGGGTTGGTCTGGATAAGCTTTGCAAGACCTAAAGCTAAGATCATACTTTGGCTGTTGATATTGAAGAAGCTCAGAACTAAACACTTACTCATTAGCTGGAATATTCAATGTGATCCTGTTTTCCCACTCTGCAAGACAGCAGATGAGAGCTGTGAGCATATGGTCTTTCATTGCCCTTACACCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253438.p1 GENE.R_Transcript_253438~~R_Transcript_253438.p1 ORF type:complete len:153 (+),score=18.20,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|4.4e-15 R_Transcript_253438:1091-1549(+)
MRWNQAATRKLFWEFTQKKDRMMWIKWLHGHYLGLTKNRRIPTQLSWMLRKIVEARDMMNGFMSTCQRDQVKINNIYQQLSEDLPKVEWYGLVWISFARPKAKIILWLLILKKLRTKHLLISWNIQCDPVFPLCKTADESCEHMVFHCPYTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST