Transcript Information: R_Transcript_253439.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88606606576305
Replicate 20.20384757685726
Replicate 31.0007797978902
Condition 2: 8 Hour
Replicate 10.71318053244404
Replicate 21.5196715814398
Replicate 30.88114614662073
Condition 3: 24 Hour
Replicate 11.2259023276929
Replicate 20.74945054482544
Replicate 30.85000794900572


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253439.p1 GENE.R_Transcript_253439~~R_Transcript_253439.p1 ORF type:complete len:206 (+),score=30.17,RVT_1|PF00078.23|1.4e-15 R_Transcript_253439:973-1590(+)
ATGAGCTGTCTTGCCTCAGTGTCCTATACAGTGTTGGTTAATGGTGAATCTGCTCCTAATTTCCAAGCTAAAAGAGGGTTAAGACAAGTTGATCCTTTATCGCCTTACCTCTTTGTTATTGCCATGGAGTACCTTTCTAGATGTTTGAAGGAAATGACTAGTAATCCTGATTTCAATTTCCACCCTAAATGCAGTAAGCAAAGGTTAACTCATTTAATTTTTGCTGACGATCTTATGCTTTTTGCAAGAGGAGATCTGGGGTCTATTCAGCTTGTTCAAGGAGCTTTTGATAAATTCTCCAAAGCTTCAGGGCTTATAGCTAATGTGAACAAGAGCTCTTTCTACAGTGGGGGACTGCCTGAAATTGAACAAAAGATATTTCTGGATTTTTTGAAGATGCAAGCAGGGGTGCTACCAGTTCGATATTTAGGCATACCCCTTTCATCTCAGAAGATCACAGTGGAACAATGTATGCCTTTAATTGATAAAATTACAGCAAAGGTGGCTAGTTGGACAATAAGATTTCTCTCCTATGCATGGAAAATCCAATTAGTACAAGCTGTGTTATTTGGAGTGTATGCTTTTTGGGCCCAAATCATTATTATTCCCAAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253439.p1 GENE.R_Transcript_253439~~R_Transcript_253439.p1 ORF type:complete len:206 (+),score=30.17,RVT_1|PF00078.23|1.4e-15 R_Transcript_253439:973-1590(+)
MSCLASVSYTVLVNGESAPNFQAKRGLRQVDPLSPYLFVIAMEYLSRCLKEMTSNPDFNFHPKCSKQRLTHLIFADDLMLFARGDLGSIQLVQGAFDKFSKASGLIANVNKSSFYSGGLPEIEQKIFLDFLKMQAGVLPVRYLGIPLSSQKITVEQCMPLIDKITAKVASWTIRFLSYAWKIQLVQAVLFGVYAFWAQIIIIPKK*

Click here to download the sequence:
Link to NCBI Protein BLAST