Transcript Information: R_Transcript_253742.p1


Annotated TAIR IDAT3G03160.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:729876-730268 | Forward length=130
E-Value2.1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3346810523477
Replicate 21.7090011966754
Replicate 30.79907224172625
Condition 2: 8 Hour
Replicate 12.5624742386652
Replicate 21.0400410158691
Replicate 32.5327828772633
Condition 3: 24 Hour
Replicate 12.6695124683377
Replicate 22.0516519898211
Replicate 31.2725409701685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253742.p1 GENE.R_Transcript_253742~~R_Transcript_253742.p1 ORF type:internal len:86 (-),score=6.80 R_Transcript_253742:1-255(-)
GCTCTAATTATATTCGCGAAGCGTAAGAGTCTTTCCTCTCCTTCCACCTCTCTCTCTCTCTCTTATTTCCCAGACCCCAGATCTAACCTCCTCCTCCTTTCTTCTCCTCCCAAATTCTCATCAATGGCGTTAGAATGGGTAGTACTTGGCTATGCAGCAGGTGCAGAGGCAATAATGGTCCTTCTATTAACCCTCCCAGGTCTCGATGGTCTTCGCAAGGGTTTGATCGTGGTCACTCGTAACCTCCTCAAACCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253742.p1 GENE.R_Transcript_253742~~R_Transcript_253742.p1 ORF type:internal len:86 (-),score=6.80 R_Transcript_253742:1-255(-)
ALIIFAKRKSLSSPSTSLSLSYFPDPRSNLLLLSSPPKFSSMALEWVVLGYAAGAEAIMVLLLTLPGLDGLRKGLIVVTRNLLKP

Click here to download the sequence:
Link to NCBI Protein BLAST