Transcript Information: R_Transcript_253756.p1


Annotated TAIR IDAT1G31790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11394744-11395973 | Reverse length=409
E-Value5.3E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95680843714251
Replicate 20.59263751175035
Replicate 30.36946350961536
Condition 2: 8 Hour
Replicate 10.64176662160119
Replicate 20.63115392293669
Replicate 31.0612836854662
Condition 3: 24 Hour
Replicate 10.74057442670013
Replicate 20.66699371644891
Replicate 31.1914677954561


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253756.p1 GENE.R_Transcript_253756~~R_Transcript_253756.p1 ORF type:complete len:496 (+),score=66.76,PPR|PF01535.16|16,PPR|PF01535.16|0.78,PPR|PF01535.16|2.3,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|4.3,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.71,PPR|PF01535.16|0.0005,PPR_2|PF13041.2|35,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|7.4e+03,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|0.028,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|36 R_Transcript_253756:130-1488(+)
ATGGAAGTCAAATCTTTGAGCTTCTTACCACCTTCAACTACTCATTTCCCTTATCCAACTTTCCAAACGAAACAAAGGGTAATAGTAACTCTCCCTCACAGCGTTCTCAAAATCACAAGACCCATACTTCCATACCCACCTCTAAAGACTACCAACAAAACCCTGCTAATTTCAAACCCTATTTCCAATCAAAACCCGCCAAAAAAAGAGAAAAGCTTTTCCCTTGATACCAATCAAAGCACAAGCTCAGATATTATACGATTAATGGATGGTCTTGGTCTTATAGTTACTCCTGATATATATGCTTCTCTTGTTGTAGAGTGTACGAAAAAGCGCGACGCCTTTCGAGCAAAAGAACTGTTTGCCCACATGAAAAGGAATCGTCGGATGGTGGGTTTTCTAAATCAGCCATCTGGGTCGGTTTTGCTTAACCGGATTTTGATGATGTTTGTGAGTTGTGGTTGTTTAGATGATGCCCACCAACTGTTTGATGAAATTCCCAACAGAGACTCCATTTCTTTGGCTATTATGATTGGGGGTTTTGTGAATCATCGGCTTTTTGGGCAAGCTTTGGACTTGTTTGCCGCGATGCACTGGTCTTTCTTCTATGGGGAGAGTGATATAGCTTTGCAAGTGGTTTCGGTTTGCGTTCTGGAGGCTTGTATGCATTTGGAGAATGTTAGTCTTGGAAAGGTTATTCATGGGTGGCTGTTTAAGATAGGTTATGGTAGAGAGTCGTTTGTGGGTACGGCCTTGATTGAGTTTTATGGAAAATTCGGATGTTTGTCGGAGGTAAACATTGCGTTCCATGAACAAGTACGAGAGGGTGATCATTGCGATACCATGGTTTGGAGGGGTGCTATTGTAAACAATTGTCGTGGAGGGCATTTCTTGGAGGTTGTAAGGATTTTCGCGGAGATGGGAAGGGCTGGTGTAAGGAAAGATGAGAACACATTTTCAAGTGTTCTTAAGGCTTGTGTTAGAGTCAATGACAGCAGATCCTATGGGCGGCAAGTTCATGCCAATGCCATCAAGCTTGCGCTTGACACCCACATTCTCGTAATGTGTGGTTTGGTTGACATGTATGGGAGATGTGGACTGTTGAATGATGCTAGGAAAGTGTTCGACATGATTGACCATGACAAAAGAAACAGAGCGTGTTGGAAGGCAATGGTGACAGGTTTTATTCAACAGGGGTTATACATTGAAGCCATAAAAGTATTGTATGAAATGAAAGCTGCTGGCATGAACCCTCAAGAATCTCTGATTGATGAAGTGAGGTTGGCTTGTGGTAGTGAGAACTTTAGAATGAGGAATAGCAAAGAGAATGTGTATATGAACAATATTGAACCAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253756.p1 GENE.R_Transcript_253756~~R_Transcript_253756.p1 ORF type:complete len:496 (+),score=66.76,PPR|PF01535.16|16,PPR|PF01535.16|0.78,PPR|PF01535.16|2.3,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|4.3,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.71,PPR|PF01535.16|0.0005,PPR_2|PF13041.2|35,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|7.4e+03,PPR_2|PF13041.2|8.2e-05,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|0.028,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|5.3e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|36 R_Transcript_253756:130-1488(+)
MEVKSLSFLPPSTTHFPYPTFQTKQRVIVTLPHSVLKITRPILPYPPLKTTNKTLLISNPISNQNPPKKEKSFSLDTNQSTSSDIIRLMDGLGLIVTPDIYASLVVECTKKRDAFRAKELFAHMKRNRRMVGFLNQPSGSVLLNRILMMFVSCGCLDDAHQLFDEIPNRDSISLAIMIGGFVNHRLFGQALDLFAAMHWSFFYGESDIALQVVSVCVLEACMHLENVSLGKVIHGWLFKIGYGRESFVGTALIEFYGKFGCLSEVNIAFHEQVREGDHCDTMVWRGAIVNNCRGGHFLEVVRIFAEMGRAGVRKDENTFSSVLKACVRVNDSRSYGRQVHANAIKLALDTHILVMCGLVDMYGRCGLLNDARKVFDMIDHDKRNRACWKAMVTGFIQQGLYIEAIKVLYEMKAAGMNPQESLIDEVRLACGSENFRMRNSKENVYMNNIEPG*

Click here to download the sequence:
Link to NCBI Protein BLAST