Transcript Information: R_Transcript_253900.p1


Annotated TAIR IDAT1G66810.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24927613-24928619 | Reverse length=310
E-Value1.6E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7025579160817
Replicate 22.3163178395204
Replicate 32.9346710087597
Condition 2: 8 Hour
Replicate 11.742766188416
Replicate 22.785163218653
Replicate 32.5838591630444
Condition 3: 24 Hour
Replicate 14.5752213692222
Replicate 21.9622116450692
Replicate 33.0377953124164


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_253900.p1 GENE.R_Transcript_253900~~R_Transcript_253900.p1 ORF type:complete len:281 (+),score=23.84,zf-CCCH|PF00642.20|2.5e-12,zf-CCCH|PF00642.20|0.00012 R_Transcript_253900:80-922(+)
ATGTTTAGTTACAATAATATGGACAAGCTGGTGGATCATGATGATGATATTGATACATCTAATTTGTCTAGCACCAACTCCTTTGACCCCTCCACCAGCAGCACCTCCCCGCCTTCCACCCCATCAGCCGAAGAATCCGTAGCGGCTGGGACCCGCCTCTACCGGGCCAGGCTCATCGTTGAGAACCACCTCTACGACCAACTCCTGAACCGGTACAGGGTAGCAGTCACGCGCCTCCGGGAGCTCACAAGGGAAGCCAATGCGCTCCAGGAGGAAAACGAGTGGCTTAGGCTGGCCAACGAAGACCTGGCTCGCCGCCTACAAAGCCTTAGCCTCGGGCCGTGGTCCGATAATCAGGAGTCAGTGGATCCCAACGCTAGCAATGACCAGAATGATGGTACTACTAGTAGCAGCAGTAGCCCAACGAGTGGTGAGCACAATGAGGGGAGAGTTACACTGCCCAAGAGCATCTCGGTTCGATCTCCTGGATATTTCAAGGGTTCAGCTCCACCAAGTCGATCTCGAATACCATCCCAGCTTGTTAACGGATCAACAAAACTGAGAGTGAGAAGAGAAGAGAAGGCAGTGGAAATGGAGGTGTTCAACCAAGGGATGTACAAGACAGAATTGTGCAACAAATGGCATGAAACAGGCACCTGCCCTTACGGCGATCACTGCCAGTTTGCTCATGGAATTTCGGAGCTCCGACCCGTTATCAGGCACCCGCGATACAAGACCCAAGTGTGTCGCATGGTTCTTGCCGGCATCACCTGTCCTTACGGCCACCGCTGCCACTTCCGCCACTCCATCCCCACCACTTCCACCGCCGGCCTCAGCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_253900.p1 GENE.R_Transcript_253900~~R_Transcript_253900.p1 ORF type:complete len:281 (+),score=23.84,zf-CCCH|PF00642.20|2.5e-12,zf-CCCH|PF00642.20|0.00012 R_Transcript_253900:80-922(+)
MFSYNNMDKLVDHDDDIDTSNLSSTNSFDPSTSSTSPPSTPSAEESVAAGTRLYRARLIVENHLYDQLLNRYRVAVTRLRELTREANALQEENEWLRLANEDLARRLQSLSLGPWSDNQESVDPNASNDQNDGTTSSSSSPTSGEHNEGRVTLPKSISVRSPGYFKGSAPPSRSRIPSQLVNGSTKLRVRREEKAVEMEVFNQGMYKTELCNKWHETGTCPYGDHCQFAHGISELRPVIRHPRYKTQVCRMVLAGITCPYGHRCHFRHSIPTTSTAGLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST