Transcript Information: R_Transcript_25398.p1


Annotated TAIR IDAT2G47980.1
Annotated Gene Namesister-chromatid cohesion protein 3
Annotated Gene Symbol(s)SCC3, ATSCC3
Annotation TypeOrtholog
Chromosome Positionchr2:19631423-19636795 | Forward length=1098
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8614647103217
Replicate 25.6206067357604
Replicate 37.192133582821
Condition 2: 8 Hour
Replicate 15.8659422378155
Replicate 26.7569633875815
Replicate 39.4546501779511
Condition 3: 24 Hour
Replicate 18.8331309115667
Replicate 27.0448739831971
Replicate 38.2625092102988


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25398.p1 GENE.R_Transcript_25398~~R_Transcript_25398.p1 ORF type:complete len:1102 (+),score=236.47,STAG|PF08514.7|4e-27 R_Transcript_25398:241-3546(+)
ATGGAAGATCCTACCGCAGCTGCCTCAGAAGCTTCAGTTCGTCGCTCGAAAAGAGTTAGAACTGGCAAGTTGAATCTTGGAGAAAACCAAAGCCCTAATGAACCTGACAGAGAAGATTATTTTGACGATTTTGAGGAACCTCCGCGTAAACCTAAGCGAAATCGTGCTGCTGAGACTCTTGATGATTCTAAACTTGACCTAACTCTCATAGAGGCTGTTAGAGGGAGCAGGAAAAATATTCCTCAAGTGGTCAAGCTGTGGGTTGAGCATTATGAAAAGGATCCAAAACCAGCGTTGGTTGATCTTTTGAGTATGCTGTTTGAGTCGTGTGGTGCGAAGTACCACATAGATGGAGATCCTGTGGAGGACGCTGATGTTGATAGTGTGGTGCTTGCTCTGGTCAATCTTGCCAAGAAGGGTGAAGTCGAGGACTACCAAAGCTCGAAACGGAAGGACTTCAATAACTTTAAAGATAACCTTGTTTACTTTTGGGACAATTTGATCATTGAATGTCAGAATGGGCCTCTATTTGATGGTCTTTTGGTTGACAAGTGCACAGACTATATCATTGCTTTGTCATGCACTCCACCACGCGTTTTTCGCCAAGTTGCTTCTTTGATTGGCCTTCAACTTGTCACTTCATTTATCACAATTGCGAAGATGCTTGGATCACAACGTGAAACTACTCAGAGACAATTGAATGCTGAAAACAAGAAAAGGGCAGATGGCCCTCGAGCAGAGTCCCTCAATAAAAGATTGATGACAACTCATGAAAAGATAACTTCAATAGAAGAGATGATGGACAAGATATTTAAAGGGTTATTTATGCATAGATATCGAGATATTGATCCCAATATACGAATGTCCTGCATACAGTCCTTGGGTGTCTGGATTTTTTCATACCCTTCGCTGTTCCTACAGGATAGATACTTGAAGTATCTTGGATGGACGCTGAACGACAAAAGTGCTGGTGTGAGAAAAGCTTCTGTCGTTGCATTGCAAAGTCTCTATGAAGTGGATGACAATGTTCCATCCCTTGATCTCTTCACACAAAGGTTTTCAAACAGGATGATTGAACTTGCTGATGATATTGATGTCTCTGTGGCTGTCTGTGCCATAGGACTTGTGAAGCAGTTGCTAAGACATCAGCTCTTATTGGATGATCACTTAGGTCCTTTGTATGATCTGCTTGTTGTTGAATCTCCAGAAATTAGGCGTGCTATAGGGGAGCTGGTTTATGATCACCTGATTGCTCAGAAATTTAACAGCTCTTTATCCAAAGCTGATGGCGAGTCTTCCCTGGTTACGCTTAGTAGAATGTTACAAATATTGAGAGAATTTTCAACTGATCCTATACTAATTACTTATGTCATCGATGATGTCTGGGAGTACATGAAGGCCATGAAAGATTGGAAGTGTATCATCTCCATGCTCCTCGATGAAAACCCATCAATTGAGCTTACTGAAATTGATGCAACAAATTTGATACGGCTCCTTTGTGCATCTGCCAAGAGGGCTGTTGGAGAGAGGATCGTACCTGCGTCCGATAATCGAAAACAATACTATACCAAGGCGCAAAAGGAAGTTCTTGAAAACAACAAGCGGGACTTAACTGTGGCCATGATGAAGAACTACCCACAGCTTCTGCGTAAATATGTGGCTGACAAGGCAAAAGCTCCATCCTTGATTGAAATGGGCCTTCAAATGAATCTTGAGCTTTATTCACTAAAGAGACAAGAACAGAACTTTAGAACTGTGCTTCAACTGATATGTGAGGCATTTTTCAAACACGGTGACAAGGACACTCTCAGATCTTGTGTAAAAGCAATGAACTTCTTCTCAGTGGAGAGTAAAGGAGAACTGCAAGATTTTGCTAGCAATAAACTGAAAGAACTTGAGGATGAACTCATAGCGAAGCTCAAGACAGCTATGAAGGAAGTAGCGGAAGGTGATGATGAATACCCTCTTCTTGTGAACTTAAAAAGACTCTATGAGCTCCAGTTGTCAAGGTCTGTACCTGTTGACAGTTTATATACAGAGTTTCCCTCTATGCTTGCGAGTTTCAGAAATATAAATGATGAGGTGAACAGCTTTTTGCTGCTGAACATGTTCCTGCACATAAAATGGTGTTTGTATAGTATTGTGAACTCGGAAACTGTATCTGAGGTGTCTGTCTCTTCTTTACTATCCAAACGTGATACCTTATTCAAGCAACTGGAATCTTTCCTTCCCACTTCTCAATCTGAAACAGATGTGGGGAGACAGCTTGCTTGTAGAGTCTGTACGATTCTTGTTGAGCTCTGGTGCTTATTCAAAAAATCTAAGTTTTCTTCTACTGCTCTGGAAGTTCTGGGCTTTTGTCCAGAACAGCCTATTGTCGAGAGATTCTGGAAACTTTGTGAGCAGCAGCTTAACATTTCAAATGAGACTGAAGATGAAGATGTCAATAGAGAGTATATTGAAGAGACAACTCGAGATACAGTTATAATTGCCGCTTCACAATTGGTGGCTAATGATACTGTTCCCAAGGAATATCTTGCTCCAGAGATCATCTCTCATTTTGTAATGCATGGGAACAACATATCCGAGGTGGTTAAGCAGCTAATAGCTATTCTAAGGAAAAAAGATGAGAATATCTTTAGCATTTATCTTGAAGCAATCAAAAGGGCCTATCATCGACATATGGTCATGCGTTTTAAGAATGATGACAAGGCTTCTGTGAACAAGTCTTTTCTTGATTGCAAGGAGCTTGCTAAGCAGCTATCAGCAACAATTGTGGGTGTGGCAAGAAGTAGGTATAGATCAGACATCCTGAAGTTTGTGGAGGATGGTATAAAGTATGCTTTTACAAACATACCTCATCAGTTATCTTTCTTAGAAGGTGCTGTCCTCCATTTTGTTGAGAAACTTCCAGTCACAGATGTTACTGAAGTCTTGAAAAATGTTCAAGGGCGTACAGAGAATATAAACACAGATGAGGATCCTAGTGGTTGGCGCCCCTACTATGTCTTTGTTGAGACCCTACGAGAAAAATGTGCAAAAATGGAAGCTCTTGCAGGTGCTGATGAGAAAGAAGGGACTTCAATAAGACGTCGAGGTCGTTCGGCACGTCCACCCAAACATAGTAAAGTACAGGGAAATAAATTATTTGAGGACCACAGTTCCAGTGAGGAAGAGGACACAATTAGCTCATCTGACCAAGACGCTCCAGAAGAAGATAAGCAGGATGATGAAGAGGATACTGCTTTGATTCATGTCATGAAATCATCAGCCAAATTCAAGTCAAGAACAACTTCTAGACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25398.p1 GENE.R_Transcript_25398~~R_Transcript_25398.p1 ORF type:complete len:1102 (+),score=236.47,STAG|PF08514.7|4e-27 R_Transcript_25398:241-3546(+)
MEDPTAAASEASVRRSKRVRTGKLNLGENQSPNEPDREDYFDDFEEPPRKPKRNRAAETLDDSKLDLTLIEAVRGSRKNIPQVVKLWVEHYEKDPKPALVDLLSMLFESCGAKYHIDGDPVEDADVDSVVLALVNLAKKGEVEDYQSSKRKDFNNFKDNLVYFWDNLIIECQNGPLFDGLLVDKCTDYIIALSCTPPRVFRQVASLIGLQLVTSFITIAKMLGSQRETTQRQLNAENKKRADGPRAESLNKRLMTTHEKITSIEEMMDKIFKGLFMHRYRDIDPNIRMSCIQSLGVWIFSYPSLFLQDRYLKYLGWTLNDKSAGVRKASVVALQSLYEVDDNVPSLDLFTQRFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLLDDHLGPLYDLLVVESPEIRRAIGELVYDHLIAQKFNSSLSKADGESSLVTLSRMLQILREFSTDPILITYVIDDVWEYMKAMKDWKCIISMLLDENPSIELTEIDATNLIRLLCASAKRAVGERIVPASDNRKQYYTKAQKEVLENNKRDLTVAMMKNYPQLLRKYVADKAKAPSLIEMGLQMNLELYSLKRQEQNFRTVLQLICEAFFKHGDKDTLRSCVKAMNFFSVESKGELQDFASNKLKELEDELIAKLKTAMKEVAEGDDEYPLLVNLKRLYELQLSRSVPVDSLYTEFPSMLASFRNINDEVNSFLLLNMFLHIKWCLYSIVNSETVSEVSVSSLLSKRDTLFKQLESFLPTSQSETDVGRQLACRVCTILVELWCLFKKSKFSSTALEVLGFCPEQPIVERFWKLCEQQLNISNETEDEDVNREYIEETTRDTVIIAASQLVANDTVPKEYLAPEIISHFVMHGNNISEVVKQLIAILRKKDENIFSIYLEAIKRAYHRHMVMRFKNDDKASVNKSFLDCKELAKQLSATIVGVARSRYRSDILKFVEDGIKYAFTNIPHQLSFLEGAVLHFVEKLPVTDVTEVLKNVQGRTENINTDEDPSGWRPYYVFVETLREKCAKMEALAGADEKEGTSIRRRGRSARPPKHSKVQGNKLFEDHSSSEEEDTISSSDQDAPEEDKQDDEEDTALIHVMKSSAKFKSRTTSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST