Transcript Information: R_Transcript_254068.p1


Annotated TAIR IDAT5G27420.1
Annotated Gene Namecarbon/nitrogen insensitive 1
Annotated Gene Symbol(s)CNI1, ATL31
Annotation TypeHomolog
Chromosome Positionchr5:9684119-9685225 | Forward length=368
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7699045806772
Replicate 21.7156510067792
Replicate 33.0304633395688
Condition 2: 8 Hour
Replicate 11.8102390427924
Replicate 23.567300215909
Replicate 32.8957822390501
Condition 3: 24 Hour
Replicate 10.98262988134142
Replicate 21.2014537917046
Replicate 31.2774924914532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_254068.p1 GENE.R_Transcript_254068~~R_Transcript_254068.p1 ORF type:complete len:257 (+),score=-4.35,zf-RING_2|PF13639.2|7.4e-12,zf-RING_11|PF17123.1|4.4e-08,zf-RING_11|PF17123.1|5.5e+02,zf-rbx1|PF12678.3|1.6e-06 R_Transcript_254068:46-771(+)
ATGAAGGTGCAAATCTTGATTCTACTCACGTCTCCAGTTGCAGTTGTTGCTCAACAGGATACAACGTCGTACATGGGCAACCTCATTTTAGTACTCTCCTTTTTGGGCCTCATAATAACCGCAGTTGTGGCAATCTTCATCCGCTTATACGCCAAGAGATGCTTGGGCCCCGCCACCAACGACAGCCACCACCAACAGTCGTTAACGGCGGCGCGTGGGATTGACGTCAAAGTGTTGCCGTCGATCAAATTCTCGGAAATTAAAATGCACGGGGTAAGCCAAAGCCGAGGAGGGGAGCTAGAGTGCGCCGTTTGCTTGTACGAGTTTCAGGATGAGGAAACCCTCTGTCTTTTACCCGATTGCTTCCACGTGTTTCACTCTCATTGCATAGCGCATTGGCTCGCGTGTCATGTCACGTGCCCCGTTTGTAGAACCACCGTGGGTAAGCAGGAATCTAGTGTGAACATGCCTCAGTCTTACATACTGGACCGGATTTCTAAAACTCTTTCCGAAACGTCTGATCATCATCATGTGGTGGTGGAAATTGACAAAATCAACCAGAATGGACCACGTAATACTGGACGATTACCCAGGTCCCACTCTACAGGAGAATTGCTGGGCCGTGTTTCGGGTGGAAACATCAGGCCCAATTTTAGCCCAATGTTTCCTAAAGAGGTGAGCCCAAAAAGAGGTTACCGGGCCAATTCCAATCGTTGGGTTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_254068.p1 GENE.R_Transcript_254068~~R_Transcript_254068.p1 ORF type:complete len:257 (+),score=-4.35,zf-RING_2|PF13639.2|7.4e-12,zf-RING_11|PF17123.1|4.4e-08,zf-RING_11|PF17123.1|5.5e+02,zf-rbx1|PF12678.3|1.6e-06 R_Transcript_254068:46-771(+)
MKVQILILLTSPVAVVAQQDTTSYMGNLILVLSFLGLIITAVVAIFIRLYAKRCLGPATNDSHHQQSLTAARGIDVKVLPSIKFSEIKMHGVSQSRGGELECAVCLYEFQDEETLCLLPDCFHVFHSHCIAHWLACHVTCPVCRTTVGKQESSVNMPQSYILDRISKTLSETSDHHHVVVEIDKINQNGPRNTGRLPRSHSTGELLGRVSGGNIRPNFSPMFPKEVSPKRGYRANSNRWVC*

Click here to download the sequence:
Link to NCBI Protein BLAST