Transcript Information: R_Transcript_254123.p1


Annotated TAIR IDAT1G19720.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6819926-6822610 | Reverse length=894
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9306016394414
Replicate 21.4132125280201
Replicate 31.7620567381656
Condition 2: 8 Hour
Replicate 10.47088201821625
Replicate 21.5050593546952
Replicate 31.3962777400298
Condition 3: 24 Hour
Replicate 10.88299258568093
Replicate 21.0603489851239
Replicate 31.2627521934749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_254123.p1 GENE.R_Transcript_254123~~R_Transcript_254123.p1 ORF type:5prime_partial len:104 (-),score=6.55,DYW_deaminase|PF14432.2|5.3e-15 R_Transcript_254123:159-470(-)
CTTTATACCTGGCTGGAGAGAATAAATGGAAAAATAAAGCTGTCTGATACAAACAGTATGCGTTCTATGCATGACGAAGATGAAAAAATTTGTGGTATCCACAGTGAGAAACTTGCCCTGGCTTTTTCTCTTGCCAGCACTCACTTCAGAATAAAATGCATAAGGATTGTGAAGAACTCCCGAATTTGTGATGAATGCCATGTGATCGCTAAATATATTTCTTCATCATATTGCTGCGACATATTATTGAGTGATACAAAATGCTTGCACCACTTCAAAAATGGCCGTTGTTCCTGTGGGGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_254123.p1 GENE.R_Transcript_254123~~R_Transcript_254123.p1 ORF type:5prime_partial len:104 (-),score=6.55,DYW_deaminase|PF14432.2|5.3e-15 R_Transcript_254123:159-470(-)
LYTWLERINGKIKLSDTNSMRSMHDEDEKICGIHSEKLALAFSLASTHFRIKCIRIVKNSRICDECHVIAKYISSSYCCDILLSDTKCLHHFKNGRCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST