Transcript Information: R_Transcript_254473.p1


Annotated TAIR IDAT1G72570.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27331381-27333698 | Forward length=415
E-Value6.2E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11503966988268
Replicate 20.22054937412078
Replicate 30.096246796622489
Condition 2: 8 Hour
Replicate 10.66873160570208
Replicate 20.32883649766449
Replicate 30.34320272181404
Condition 3: 24 Hour
Replicate 10.04823068745316
Replicate 20.23167288750606
Replicate 30.1379477186149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_254473.p1 GENE.R_Transcript_254473~~R_Transcript_254473.p1 ORF type:complete len:476 (+),score=99.98,AP2|PF00847.16|2.1e-12,AP2|PF00847.16|2.8e-09 R_Transcript_254473:138-1565(+)
ATGATTGCAGGCTTAAAAGTGGACGCGTCCACAGAATGGGGGTATGAAGATGATGATGATGATCACCAACATGAGCATGATGAACACCCAAAGCTAGAAGATTTCTTGGGTTGCTGCTACTCAAGTACTCCAACTTCAGACCATCAAGAGGAAAAAATGGTGAACATCAATGTAAATGCACTGCCTTCAGAATTTTCCCCAACCCCAAATGCCTTTCAAATCCAAACATGCCTTTATTCTTCTCCACCTGCTACTGGTTGCTACTCTCCCTTTGATGGTGCTGCTATCTCAGAGTTCAAGTCATGGCTCAGGCAAAACCCCACCCCCTCTATGGTGGGTCCCATCAATGGGTTCCAATTTCAGGCACTTCCTCTAGCCATGACCCAAAATGTGGGGCCCTTAGATGGGGTGCTTGATAGCAAGAAAAGATGCCAATCCAAATCACTTGCAAATAATAGTACTAGTAGTAGGGAGCCAGTTGCCAGGAAATCAATTGATACCTTTGGCCAGAGGACTTCTCAATATCGTGGAGTAACAAGGCATAGGTGGACAGGAAGATATGAGGCCCATTTATGGGATAACAGTTGCAGAAAAGAAGGACAAACCAGGAAAGGAAGGCAAGTTTATCTTGGTGGTTATGACATGGAAGAAAAAGCAGCCAGAGCTTACGATTTAGCAGCACTAAAATATTGGGGCCCAACTACGCATATAAATTTCCCTCTAAGTAATTATGAGAAAGAACTTGAAGAGATGAAGAACATGAATAGACAAGAATTTGTGGCTCATCTCAGAAGGCAAAGCAGTGGGTTTTCAAGAGGGGCATCAATGTACAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAGGCTCGAATTGGAAGAGTAGCAGGAAACAAGGACTTGTACCTCGGCACTTTTAGCACACAAGAGGAAGCAGCTGAGGCATATGACATAGCAGCAATCAAGTTTAGAGGAACAAGTGCAGTAACCAATTTTGACATTAGCAGGTACGATGTCAAGAGAATATGTTCGAGCTCCACCCTCATTGGAGGTGATCTAGCAAAACGGTCACGAAACAAGGACTCAACTACTAATTTGTCTTCCATTGAAGATTACAATTCTCGCCCTCAACAATTACCGCTAACTTTGACAAATGGCGAGACTACATCCTCCGATGACTTGGCAGATATGATGTGGAATGTTGATGGCTCTAATATCACAATGTCAAGGGAGTCTTCCAGCACAACAAGCCCAAAGAGCTCCATTGGGCCGGCTCAGGACTTTGTCGGAGGAGGAGATCAGTACTCTCCGAGATATACTGTGTCCGAAGATGATGTTGGTGGTGATGGCGGTGGCGGCAGTGATGGGCTTAAGAACCTAGGTGTGATTCCTCAGGTTCCAGTGTTTGCACTTTGGAATGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_254473.p1 GENE.R_Transcript_254473~~R_Transcript_254473.p1 ORF type:complete len:476 (+),score=99.98,AP2|PF00847.16|2.1e-12,AP2|PF00847.16|2.8e-09 R_Transcript_254473:138-1565(+)
MIAGLKVDASTEWGYEDDDDDHQHEHDEHPKLEDFLGCCYSSTPTSDHQEEKMVNINVNALPSEFSPTPNAFQIQTCLYSSPPATGCYSPFDGAAISEFKSWLRQNPTPSMVGPINGFQFQALPLAMTQNVGPLDGVLDSKKRCQSKSLANNSTSSREPVARKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPTTHINFPLSNYEKELEEMKNMNRQEFVAHLRRQSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIGGDLAKRSRNKDSTTNLSSIEDYNSRPQQLPLTLTNGETTSSDDLADMMWNVDGSNITMSRESSSTTSPKSSIGPAQDFVGGGDQYSPRYTVSEDDVGGDGGGGSDGLKNLGVIPQVPVFALWNE*

Click here to download the sequence:
Link to NCBI Protein BLAST