Transcript Information: R_Transcript_2547.p1


Annotated TAIR IDAT5G08280.1
Annotated Gene Namehydroxymethylbilane synthase
Annotated Gene Symbol(s)HEMC
Annotation TypeOrtholog
Chromosome Positionchr5:2663763-2665596 | Reverse length=382
E-Value8.5E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1869907134686
Replicate 212.965457399926
Replicate 38.4448802197797
Condition 2: 8 Hour
Replicate 113.879084739683
Replicate 28.0375519982142
Replicate 35.0188785125494
Condition 3: 24 Hour
Replicate 12.2217232801004
Replicate 27.0129625043771
Replicate 38.1700648831276


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2547.p1 GENE.R_Transcript_2547~~R_Transcript_2547.p1 ORF type:complete len:217 (+),score=43.32,Porphobil_deam|PF01379.16|2.5e-20,Porphobil_deam|PF01379.16|1.3e+03,Porphobil_deamC|PF03900.11|1.6e-14 R_Transcript_2547:718-1368(+)
ATGTCTGATAGTGGGAGTTCCTCCTCCTACCATGTCACCCCTTGCCCTTTCCAGGATGCCACCCTCTTGGAGAGGCGGATACGCCATCTAGAGAAGGGGACTGATAACTCCATGAGATTCCTTCATGTTGTCGGCTACATGGAAGCTACTGTACTAGATAACTTCCGTGGCAACGTGCAAACACGGTTGAGAAAACTTAATGAGGGGATAGTGCAAGCTACGCTTTTGGCCCTGGCTGGACTCAAGCGCTTAAGTATGACTGAAAATGTTACTTCTGTTCTTTCGATTGATGACATGCTTCCAGCTGTTGCGCAAGGTGTAATTGGAATTGCGTGCAGAAATGATGATGACAAAATGGCAAGCTACTTGGCCTCTTTAAATGACGAGGAGACCAGATTAGCGGTTGCTTGTGAAAGAGCTTTTCTTGAGACTTTGGATGGGTCGTGTCGCACACCTATTGCTGGATATGCTTGCAGAGATGAAAACGGAGACTGCCTCTTCAGAGGGCTTGTGGCTTCTACAGACGGGAAGCAAGTAATAGAAACCTCTCGGAGGGGCCTGTATGCCCTTGACGATATGATCTCAATGGGAAAGGATGCTGGAAAGGAGCTTCTTTCACAAGCTGGTCCTGGCTTTTTTGATCCAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2547.p1 GENE.R_Transcript_2547~~R_Transcript_2547.p1 ORF type:complete len:217 (+),score=43.32,Porphobil_deam|PF01379.16|2.5e-20,Porphobil_deam|PF01379.16|1.3e+03,Porphobil_deamC|PF03900.11|1.6e-14 R_Transcript_2547:718-1368(+)
MSDSGSSSSYHVTPCPFQDATLLERRIRHLEKGTDNSMRFLHVVGYMEATVLDNFRGNVQTRLRKLNEGIVQATLLALAGLKRLSMTENVTSVLSIDDMLPAVAQGVIGIACRNDDDKMASYLASLNDEETRLAVACERAFLETLDGSCRTPIAGYACRDENGDCLFRGLVASTDGKQVIETSRRGLYALDDMISMGKDAGKELLSQAGPGFFDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST