Transcript Information: R_Transcript_2548.p1


Annotated TAIR IDAT5G08280.1
Annotated Gene Namehydroxymethylbilane synthase
Annotated Gene Symbol(s)HEMC
Annotation TypeOrtholog
Chromosome Positionchr5:2663763-2665596 | Reverse length=382
E-Value2.7E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.480846770715
Replicate 217.671886183718
Replicate 322.015920022969
Condition 2: 8 Hour
Replicate 120.744968913638
Replicate 231.864256623689
Replicate 332.420793413636
Condition 3: 24 Hour
Replicate 130.80172469717
Replicate 220.646172905902
Replicate 325.657253827419


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2548.p1 GENE.R_Transcript_2548~~R_Transcript_2548.p1 ORF type:complete len:360 (+),score=74.55,Porphobil_deam|PF01379.16|5.8e-72,Porphobil_deam|PF01379.16|3.8e+03,Porphobil_deamC|PF03900.11|4e-14 R_Transcript_2548:106-1185(+)
ATGGAGGCTTTAGCAGGCACAGGATTTTGTTTGCCATCCATAAAACCTCCAGCTTTAAAGCTTCACAATCATGTCAGAAAGCAAAGATTCATGGTGACAAAAGCCTCCATTGCTGTAGAACAACAGAACCCTGAAACCAAACTTGCTCTTGTTAGAATTGGCACTCGAGGAAGTCCACTAGCCCTTGCTCAAGCCTATGAAACGCGTGACAAGCTCATCAAATCTCACAATGAGTTGGCTGAGGATGGAGCCATTCAAATTGTGATAATAAAAACTACCGGAGACAAAGTACTTACTCAACCACTTGCAGACATAGGTGGGAAGGGCTTGTTTACAAAGGAGATAGATGAGGCCCTCTTAAATAATGAGATTGACATTGCTGTCCACTCCATGAAGGATGTTCCCACATATTTACCGGACAAGATAATTCTTCCGTGTAATCTTGAGCGTGAGGATGTTCGTGATGCCTTTATCTCCACTTCTGCTGCTTCCCTAGGAGAGTTGCCAGCTGGTAGTGTTGTTGGTACTGCCTCTCTGAGAAGAAAATCCCAATTACTCCATAGATATCCATCACTTAATGTACTAGATAACTTCCGTGGCAACGTGCAAACACGGTTGAGAAAACTTAATGAGGGGATAGTGCAAGCTACGCTTTTGGCCCTGGCTGGACTCAAGCGCTTAAGTATGACTGAAAATGTTACTTCTGTTCTTTCGATTGATGACATGCTTCCAGCTGTTGCGCAAGGTGTAATTGGAATTGCGTGCAGAAATGATGATGACAAAATGGCAAGCTACTTGGCCTCTTTAAATGACGAGGAGACCAGATTAGCGGTTGCTTGTGAAAGAGCTTTTCTTGAGACTTTGGATGGGTCGTGTCGCACACCTATTGCTGGATATGCTTGCAGAGATGAAAACGGAGACTGCCTCTTCAGAGGGCTTGTGGCTTCTACAGACGGGAAGCAAGTAATAGAAACCTCTCGGAGGGGCCTGTATGCCCTTGACGATATGATCTCAATGGGAAAGGATGCTGGAAAGGAGCTTCTTTCACAAGCTGGTCCTGGCTTTTTTGATCCAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2548.p1 GENE.R_Transcript_2548~~R_Transcript_2548.p1 ORF type:complete len:360 (+),score=74.55,Porphobil_deam|PF01379.16|5.8e-72,Porphobil_deam|PF01379.16|3.8e+03,Porphobil_deamC|PF03900.11|4e-14 R_Transcript_2548:106-1185(+)
MEALAGTGFCLPSIKPPALKLHNHVRKQRFMVTKASIAVEQQNPETKLALVRIGTRGSPLALAQAYETRDKLIKSHNELAEDGAIQIVIIKTTGDKVLTQPLADIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTSAASLGELPAGSVVGTASLRRKSQLLHRYPSLNVLDNFRGNVQTRLRKLNEGIVQATLLALAGLKRLSMTENVTSVLSIDDMLPAVAQGVIGIACRNDDDKMASYLASLNDEETRLAVACERAFLETLDGSCRTPIAGYACRDENGDCLFRGLVASTDGKQVIETSRRGLYALDDMISMGKDAGKELLSQAGPGFFDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST