Transcript Information: R_Transcript_255118.p1


Annotated TAIR IDAT3G24520.1
Annotated Gene Nameheat shock transcription factor C1
Annotated Gene Symbol(s)AT-HSFC1, HSFC1
Annotation TypeOrtholog
Chromosome Positionchr3:8941455-8942531 | Forward length=330
E-Value9E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76693113255121
Replicate 20.17643949929662
Replicate 30.38498718648996
Condition 2: 8 Hour
Replicate 10.82305428394101
Replicate 20.75162628037599
Replicate 31.2202763442277
Condition 3: 24 Hour
Replicate 10.19292274981264
Replicate 20.7413532400194
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_255118.p1 GENE.R_Transcript_255118~~R_Transcript_255118.p1 ORF type:5prime_partial len:119 (-),score=-2.22,HSF_DNA-bind|PF00447.13|1.6e-21 R_Transcript_255118:66-422(-)
CTTCTTCTCCATCCACACAACGAGCGAGCTGAGATAGAACAGAATACCAACCTACCCCTGAGCAAAAATTATAAGGTAGGGATCGTATGCGAAAGGGAGCAGATGGAGCAAGGTGGGAACAGCACGAATACAATAGCGCCGTTTGTGATGAAAACTTATCAGATGGTGAACGACCCTTCTACTGATCATATCATCCGTTGGGGACCAGCTTATAACAGTTTTATTGTGGTCGACCCTTTAGACTTCTCTCAGCGTATCCTTCCCTCCTTTTTCAAGCATAACAATTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATGTAAGTTTCTCTTCTCTTATGTTTTCATATCATTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_255118.p1 GENE.R_Transcript_255118~~R_Transcript_255118.p1 ORF type:5prime_partial len:119 (-),score=-2.22,HSF_DNA-bind|PF00447.13|1.6e-21 R_Transcript_255118:66-422(-)
LLLHPHNERAEIEQNTNLPLSKNYKVGIVCEREQMEQGGNSTNTIAPFVMKTYQMVNDPSTDHIIRWGPAYNSFIVVDPLDFSQRILPSFFKHNNFSSFVRQLNTYVSFSSLMFSYHF*

Click here to download the sequence:
Link to NCBI Protein BLAST