Transcript Information: R_Transcript_255434.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38836087137699
Replicate 20.063818542298778
Replicate 30.069625342237545
Condition 2: 8 Hour
Replicate 10.29770048568079
Replicate 20
Replicate 30.27586034377488
Condition 3: 24 Hour
Replicate 10.069780569081168
Replicate 20.13407452213117
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_255434.p1 GENE.R_Transcript_255434~~R_Transcript_255434.p1 ORF type:3prime_partial len:329 (-),score=45.14,RVT_1|PF00078.23|3.8e-42 R_Transcript_255434:3-986(-)
ATGTGCCGGAGTTTGAACTCCACCTTCATTACTCTTGTTCCCAAGAAGGATAGATCGATTAAGGTTCGGGATTTCAGGCCAATTAGTCTGGTGACTAGTGTCTATAAGATTATAACCAAGCTCCTGTCTATTCGCTTGGGCGCGGTGTTGCCTTCTACGATTTCTACTTCACAGAGTGCTTTCGTTGAGGGTAGGCAAATCTTGGACGCTGCTCTCGTGGCTAATGAGGTGGTGGATGATGCTCGGAGGTCGGGGTTCCAGGGGATGGTCTTCAAGCTGGACTTTGAGAAGGCCTATGACAGAGTTAGTTGGGCTTTTCTTGATCGGGTACTCCAACGTAAGGGGTTCGGGGAGAGATGGAGGCAGTGGGTGAGGGGTTGTTCCTCTAATGCTGCGTTCTCTGTTTTGGTGAATGGGGCCCCAAGGGAGTGGTTCACGTCCTCCCGGGGGTTGAGACAAGGGGACCCCCTGTCCCCTTTCCTGTTTACTTTGGTGGCAGATGTGCTTAGTAGGCTGTTGGATAGGGCGGTGGATAGAGGAGTGGTGGATGGTTTTCATGTAGGGAGAGAGGTTCTGCGGGTCTCACACTTGTTGTTTGCAGATGATGCTATTCTGTTTCTGGGAAAGGATCTGTCGAGTTTTAGACACGTGCTTACTATCTTGCAAGTGTTTGAGGCTATTTCGGGAATGCGGGTCAATCTTGGCAAATGTAGTTTGGCTGGAGTTAACATGGACCCAGAGGTTTTGAATTCTTATGCTCTGTTGGCTGGTTGTCAAGTCCATAGCTGGCCGATGGTTTATCTTGGTGTCCCTCTTGGGGGCAACCCACGTTCGGTCTCTTTTTGGGATCCAGTGGTAGTACATGTTGCTGGTCGGATGGAGGGATGGAAGGGTGCATACTTCTCTTTTGGAGGTCGTATTACATTGTTGCAGTCTTGTTTGTCTAGCATTCCCTTGTACTATTTGTCCTTATTCCGCATCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_255434.p1 GENE.R_Transcript_255434~~R_Transcript_255434.p1 ORF type:3prime_partial len:329 (-),score=45.14,RVT_1|PF00078.23|3.8e-42 R_Transcript_255434:3-986(-)
MCRSLNSTFITLVPKKDRSIKVRDFRPISLVTSVYKIITKLLSIRLGAVLPSTISTSQSAFVEGRQILDAALVANEVVDDARRSGFQGMVFKLDFEKAYDRVSWAFLDRVLQRKGFGERWRQWVRGCSSNAAFSVLVNGAPREWFTSSRGLRQGDPLSPFLFTLVADVLSRLLDRAVDRGVVDGFHVGREVLRVSHLLFADDAILFLGKDLSSFRHVLTILQVFEAISGMRVNLGKCSLAGVNMDPEVLNSYALLAGCQVHSWPMVYLGVPLGGNPRSVSFWDPVVVHVAGRMEGWKGAYFSFGGRITLLQSCLSSIPLYYLSLFRIL

Click here to download the sequence:
Link to NCBI Protein BLAST