Transcript Information: R_Transcript_255750.p1


Annotated TAIR IDAT1G62360.1
Annotated Gene NameKNOX/ELK homeobox transcription factor
Annotated Gene Symbol(s)STM, BUM1, SHL, WAM1, BUM, WAM
Annotation TypeOrtholog
Chromosome Positionchr1:23058796-23061722 | Reverse length=382
E-Value2.6E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71580239038113
Replicate 20.58813166432207
Replicate 30.96246796622489
Condition 2: 8 Hour
Replicate 15.0069135606412
Replicate 20.37581314018799
Replicate 30.61013817211385
Condition 3: 24 Hour
Replicate 10.38584549962528
Replicate 20.98847098669254
Replicate 30.73572116594613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_255750.p1 GENE.R_Transcript_255750~~R_Transcript_255750.p1 ORF type:complete len:357 (+),score=94.52,KNOX1|PF03790.9|3.5e-23,KNOX1|PF03790.9|5.1e+03,KNOX2|PF03791.9|9.7e-21,Homeobox_KN|PF05920.7|6.4e-17,Homeobox_KN|PF05920.7|2e+03,ELK|PF03789.9|1e-10,Homeobox|PF00046.25|5.8e-07 R_Transcript_255750:272-1342(+)
ATGGAAGGTGGAGGAGAGAATATTAATGGTGGTGGTGGTGGGAATGGAAGTTCATCATCATCATCTTGTTTGATGATGGAGAATGGTTTGTTATACCATCCTACTATGTTTATGATCCCTCCTCACCATCATCCCTGTCATCATAATTACCATCATCATGGCATGAGCAACAAACATCATCATCATCAACAACAACAGCATCAGCAACTTGGCGGTGTTGTTTGTTCTGGATATGATCTTACGAACAACATGAGCAACACCAACAACACCAGCAACAGTAATGGGAGTATTAAGGCCAAAATAATGGCTCATCCTCACTACCCTCGTTTGCTTTCTGCTTATGTTAACTGTCAGAAGGTGGGAGCACCACCAGAAGTGGTGGCGCGGCTGGAGGAAGCAGAAGGGGTGGTGGGTGGTGGTGGAGGTGGATATGTAGGAGAAGATCCAGCTTTAGATCAATTTATGGAAGCTTATTGTGAGATGCTTACCAAATATGAGCAAGAACTAACCAAGCCTTTTAAAGAAGCTATGCTTTTCCTTTCAAGGGTTGAATGCCAATTCAAAGCCCTTACCCTTTCTTCTTCTTCTGATTCTCCTTCTTCTGCTTGTGGAGAGGGTTTTGATAGGAATGGATCTTCTGAAGAAGATATCGATGTGAACAACAACTTAATTGATCCTTCGGCTGAAGATCGAGAGCTGAAAGGCCAGCTACTCCGCAAGTACAGCGGGTATTTGGGAAGTTTGAGACAGGAGTTCTTGAAAAAGAGGAAGAAGGGAAAACTGCCAAAGGAAGCCAGGCAACAATTGCTTGATTGGTGGAGTAGGCACTACAAATGGCCTTACCCATCTGAATCCCAGAAGCTTGCCCTAGCTGAGTCAACAGGGCTAGATCAGAAGCAGATAAACAACTGGTTCATTAACCAAAGGAAGCGACATTGGAAGCCGTCGGAGGACATGCAGTTTGTGGTGATGGATGCCGCTTCTCATTCCCATGCTCATCCCCACTACAATTACATGGACAATGTCCTCGGAAATCCATTTCCGATGGATGTCTCCCCTACGCTTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_255750.p1 GENE.R_Transcript_255750~~R_Transcript_255750.p1 ORF type:complete len:357 (+),score=94.52,KNOX1|PF03790.9|3.5e-23,KNOX1|PF03790.9|5.1e+03,KNOX2|PF03791.9|9.7e-21,Homeobox_KN|PF05920.7|6.4e-17,Homeobox_KN|PF05920.7|2e+03,ELK|PF03789.9|1e-10,Homeobox|PF00046.25|5.8e-07 R_Transcript_255750:272-1342(+)
MEGGGENINGGGGGNGSSSSSSCLMMENGLLYHPTMFMIPPHHHPCHHNYHHHGMSNKHHHHQQQQHQQLGGVVCSGYDLTNNMSNTNNTSNSNGSIKAKIMAHPHYPRLLSAYVNCQKVGAPPEVVARLEEAEGVVGGGGGGYVGEDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFLSRVECQFKALTLSSSSDSPSSACGEGFDRNGSSEEDIDVNNNLIDPSAEDRELKGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAASHSHAHPHYNYMDNVLGNPFPMDVSPTLM*

Click here to download the sequence:
Link to NCBI Protein BLAST