Transcript Information: R_Transcript_256051.p1


Annotated TAIR IDAT2G17972.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7821624-7822100 | Forward length=158
E-Value1.1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0296542077021
Replicate 21.0767333546819
Replicate 31.4096453905325
Condition 2: 8 Hour
Replicate 10.62784269095501
Replicate 21.2613830782207
Replicate 31.0239370093552
Condition 3: 24 Hour
Replicate 10.70639406854474
Replicate 20.9048311339724
Replicate 30.7857124759399


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_256051.p1 GENE.R_Transcript_256051~~R_Transcript_256051.p1 ORF type:5prime_partial len:195 (+),score=21.74 R_Transcript_256051:1-585(+)
ACCCATCCACTCACTCTTGACAGCAAAAGAAAAGCCATGACCATGAACACCACCAATACACTCCGTTCCCAAGTCTTCAGAAAACCCTCCATAATCACATCCCACTTTCAATTCAAACCCCTATCTCAATCTCAACTTCCCAGATTGCCTATAATTCTCCCTCCTATTCGCAGCAGCAACAGCAATGGTCAAGGCAGCAATGATGGAGGCAGTCCACAACCACCAACGCCGTCGCCGCCCCCAATCACACCGCTAAGTGCCGTGGAGATAAGGTTTCGCAGAGGGTCAAGAAAGCGGCAGCGACAGCAGCAACAGAAAAATTCCGCTACTGAACTGCCAAACACGACGATGACTCGGACTCCAGCTCCCAAAAGCTGGGAAGAAATGACCCTGTCAGAGAAGGCACTGGAGCTGTACCTGGGTGAGAAAGGCTTACTTTTTTGGCTCAACAAATTTGCCTATGCTTCCATTTTTATTATCATTGGAGCTTGGATACTGTTTAGATTTGTCGGGCCATCACTAAATCTTTACCAACTCGATTCCCCAACACTTCCTCCTGATGCCATGTTCAAGGGTTCCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_256051.p1 GENE.R_Transcript_256051~~R_Transcript_256051.p1 ORF type:5prime_partial len:195 (+),score=21.74 R_Transcript_256051:1-585(+)
THPLTLDSKRKAMTMNTTNTLRSQVFRKPSIITSHFQFKPLSQSQLPRLPIILPPIRSSNSNGQGSNDGGSPQPPTPSPPPITPLSAVEIRFRRGSRKRQRQQQQKNSATELPNTTMTRTPAPKSWEEMTLSEKALELYLGEKGLLFWLNKFAYASIFIIIGAWILFRFVGPSLNLYQLDSPTLPPDAMFKGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST