Transcript Information: R_Transcript_25614.p1


Annotated TAIR IDAT5G09450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2941864-2943324 | Forward length=409
E-Value3.7E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.261656153223
Replicate 228.49870056505
Replicate 333.479078025146
Condition 2: 8 Hour
Replicate 126.976982721034
Replicate 231.627053720784
Replicate 337.924705067905
Condition 3: 24 Hour
Replicate 136.459048699083
Replicate 236.831735070369
Replicate 338.181281376895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25614.p1 GENE.R_Transcript_25614~~R_Transcript_25614.p1 ORF type:complete len:403 (+),score=61.63,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.075,PPR|PF01535.16|0.74,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|4.7,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|3.9e+02,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|0.0093,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|11,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|1.2e+03 R_Transcript_25614:179-1387(+)
ATGGCTGCTCGTTCTATCCTCCTTTCCCTCAGACGGAGATTCATCACAATCCCTACTACCTACAAAATCGGGGTGAAACATCTATCTTCGGACGCCTTGCAAAATGAATCCCTAGAAGACGATTTACCCCCAAATTCACCACCAGACGATTTGAAAAGCCGGATCTTCCGCCTTAGGCTTCCCAAACGGAGCGCTACCAATATCATCCAGAAATGGGTCAACGAAGGCAACTCTGTTTCTCTCTCCGAGCTTCGTCATATTTGTAGAGAGCTTCGTAAATCCCATCGTTACAAGCACGCTCTCGAGATAACAGAATGGATGGTTTCTCATGATGAACTCGAGGTGTCCGATTCAGACTATGCTGCCCGCATTGATCTGATGACAAAAGTTTTTGGAATAGATGCTGCTGAACGGTACTTCGAAGGTCTTCCTGATGTTGCTAAAACGAACGAAACATACACAGCTCTTCTCCATTCTTATGCAGGCGCTAGATTGATTGAGAAAGCTGAGGATCTCTTTCAACAAATGCAGGATTCAGGTTTATCTTTCAGTGCGATTACATACAACGAGATGATGACTCTATACATGTCTGTCGGTCAAGTGGAAAAAATTTCTTCAGTTATTGAAGAACTGAAACGTCAAAAGGTTGCACCAGATCTCTTTACTTATAATCTGTGGGTAAGTTCTTGTGCTGCTACTCTAGATATTGATGGGGTACGTAACATTCTTGACGAAATGAGCAACTATTCTAGTTCTGATGAAGATTGGGCAAGGTACCGGTTCCTTGCTGACATTTATATTACCACTGGCCAACTCTCTCCATCTGGGGCAAGCTCCCTTGTAGAAGCTGAAAAGGGCATTACTCAGAGAGAGTGGATTACTTACGATTTCCTTATCATATTGCATGCTGGCTTGGGAAACAAGGATATGGTTGACCAAATATGGAAATCCTTGAGGATGACCAAGCACAAAATGATCAGTCGCAATTATGTACCAATCATTTCTTCATATTTGATGCTAGGGCATATGAGAGAGGTGGAAGAAGTTATTGATCAGTGGAAGAACTCCACAACCTCAGTTTTTGATAGCTCCGTCTGTGATAGATTGGTGGATGCATTTGCAGAAGCTGGTTTCACAGAAAGAGCTGAAGATTTCTGTTTGCTTTTAAGCCATAAAGCGACCACTACTTCCTGTGATGAACTGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25614.p1 GENE.R_Transcript_25614~~R_Transcript_25614.p1 ORF type:complete len:403 (+),score=61.63,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.075,PPR|PF01535.16|0.74,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|4.7,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|2.9e-08,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|3.9e+02,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|0.0093,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|11,PPR_3|PF13812.2|6.2e+03,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|0.0073,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|1.2e+03 R_Transcript_25614:179-1387(+)
MAARSILLSLRRRFITIPTTYKIGVKHLSSDALQNESLEDDLPPNSPPDDLKSRIFRLRLPKRSATNIIQKWVNEGNSVSLSELRHICRELRKSHRYKHALEITEWMVSHDELEVSDSDYAARIDLMTKVFGIDAAERYFEGLPDVAKTNETYTALLHSYAGARLIEKAEDLFQQMQDSGLSFSAITYNEMMTLYMSVGQVEKISSVIEELKRQKVAPDLFTYNLWVSSCAATLDIDGVRNILDEMSNYSSSDEDWARYRFLADIYITTGQLSPSGASSLVEAEKGITQREWITYDFLIILHAGLGNKDMVDQIWKSLRMTKHKMISRNYVPIISSYLMLGHMREVEEVIDQWKNSTTSVFDSSVCDRLVDAFAEAGFTERAEDFCLLLSHKATTTSCDELK*

Click here to download the sequence:
Link to NCBI Protein BLAST