Transcript Information: R_Transcript_25628.p1


Annotated TAIR IDAT5G54530.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22152781-22154201 | Forward length=161
E-Value1.4E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1137.38265824961
Replicate 2160.7110441439
Replicate 3158.76318663716
Condition 2: 8 Hour
Replicate 197.422483939039
Replicate 2107.28465649335
Replicate 398.675244968274
Condition 3: 24 Hour
Replicate 181.573485255885
Replicate 291.623176561388
Replicate 395.816919985726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25628.p1 GENE.R_Transcript_25628~~R_Transcript_25628.p1 ORF type:complete len:188 (+),score=25.86,DUF538|PF04398.8|1e-27 R_Transcript_25628:71-565(+)
ATGGCTTCACAAACCCAAATCAAAAAATCTCTACTACTAATACTAACAATCTTGATATATTTTTGCACCCTTTGTTTATCATCACCAACAGTCCATGACCTCCTAAAGAAGAAAGGTTTACCAGCAGGGCTGCTCCCAAAAGAGGTAAAATCATTTGAATACAATGAAGAAAATGGGATTTTGGAAGTATTTCTTGATGGTCCATGTATGACAAAATTTGAGAACAGGGTAATATTTGAAAGTGTTGTAAGAGCTAATTTGAGCTATGGGGAGCTTATGGGTGTTGTTGGTTTGTCTCAAGAAGAACTCTTTATTTGGTTACCTGTTAAAGAAATTGCTGTAAATGACCCTAAATCTGGGATTATCTTGTTTGATATTGGTATGGCTCAAAAGCAATTCTCTTTGTCTCTCTTTGAAGATCCACCTAGTTGCAAGCCTCAAGAAGGACTTATAAATTACAATGGAAGGAAAGATAAAGGGTTTGGAATTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25628.p1 GENE.R_Transcript_25628~~R_Transcript_25628.p1 ORF type:complete len:188 (+),score=25.86,DUF538|PF04398.8|1e-27 R_Transcript_25628:71-565(+)
MASQTQIKKSLLLILTILIYFCTLCLSSPTVHDLLKKKGLPAGLLPKEVKSFEYNEENGILEVFLDGPCMTKFENRVIFESVVRANLSYGELMGVVGLSQEELFIWLPVKEIAVNDPKSGIILFDIGMAQKQFSLSLFEDPPSCKPQEGLINYNGRKDKGFGIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST