Transcript Information: R_Transcript_25673.p1


Annotated TAIR IDAT1G11240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3766936-3768212 | Reverse length=200
E-Value5.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.191789644686
Replicate 266.235751828734
Replicate 360.218743165143
Condition 2: 8 Hour
Replicate 153.767930244982
Replicate 254.749581827645
Replicate 354.641961867557
Condition 3: 24 Hour
Replicate 161.29971208222
Replicate 256.275016241421
Replicate 359.345013738701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25673.p1 GENE.R_Transcript_25673~~R_Transcript_25673.p1 ORF type:complete len:194 (+),score=61.22,Nop25|PF09805.5|4e-15,Nop25|PF09805.5|3.4e+03 R_Transcript_25673:121-702(+)
ATGGAAGCAGGCCCGGAAGCCCTCGTAGTGGGTCAGCCAAGCGCAAACCACATCAAGAAGAGGTCTCTTAGAAACAAAGCTCTTTCCATCTCTTTCAACGAGAAAGATCTGAAGGACTATGTGGGTGGTTTCCACAAGAGGAAGAAGAAGAGGAGAAAGGAAGCCCAGAAGCAGCAAGAAGAAGCAGAACGACGTAGGCGTCTAGAAGAGCGTAAAATGAGGAGATTGGAAAAAGAGTATGCATTAAATGGTGGTGCTCCACCTGCAAATGATGCTGAACCCAATGGTGAGGATTTGGAGGAGGAGAAGCCCAAATCATCGATTTCTGGAACAACAACGTATGAAAATGGCGATGTTATGGTCACCGTTACTACAAGTGAGATCACTGCTGAAGAAGTGGAGCATCCAAGTGAAAAGTCAGCACCATTACTGCCGGTGTCAAATGGAGAGGCCAAGAAAAAGCATAATATTCCCGTGAGCAAGAAAAAGCCCTTTAAAAAAGCAACAAAAGGTAGATCACGTCCAAAGCTACACAGCAAAAGAGACAGAAGGAAAGGGAAGAAAAATAGCAGAGGGCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25673.p1 GENE.R_Transcript_25673~~R_Transcript_25673.p1 ORF type:complete len:194 (+),score=61.22,Nop25|PF09805.5|4e-15,Nop25|PF09805.5|3.4e+03 R_Transcript_25673:121-702(+)
MEAGPEALVVGQPSANHIKKRSLRNKALSISFNEKDLKDYVGGFHKRKKKRRKEAQKQQEEAERRRRLEERKMRRLEKEYALNGGAPPANDAEPNGEDLEEEKPKSSISGTTTYENGDVMVTVTTSEITAEEVEHPSEKSAPLLPVSNGEAKKKHNIPVSKKKPFKKATKGRSRPKLHSKRDRRKGKKNSRGH*

Click here to download the sequence:
Link to NCBI Protein BLAST