Transcript Information: R_Transcript_25676.p1


Annotated TAIR IDAT1G11240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3766936-3768212 | Reverse length=200
E-Value4E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.567616287281
Replicate 229.654568629205
Replicate 336.367397833067
Condition 2: 8 Hour
Replicate 127.010180921188
Replicate 235.385519202288
Replicate 329.098715994538
Condition 3: 24 Hour
Replicate 135.14674611664
Replicate 233.651322843355
Replicate 328.544274668995


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25676.p1 GENE.R_Transcript_25676~~R_Transcript_25676.p1 ORF type:complete len:194 (+),score=61.71,Nop25|PF09805.5|7.9e-12,Nop25|PF09805.5|4e+03 R_Transcript_25676:146-727(+)
ATGGAAGCAGATTCCGAAGCCGCCGTAGTGGGTCAGCCAAGCGCAAACCACATCAAGAAGAGGTCTCTTCGTAACAAAGCTCTTTCCATCTATTTCAACGAGAAAGATTTGAAGGACTATGTGGATGGTTTCCACAAGAGGAAGAAGAAGAGGAGAAAGGAAGCCCAGAAGCAGCAAGAAGAAGCAGAACGACGTAGGCGTCTAGAAGAGTGTAAAAGGAGGAGATTGGAAAAAGAGTATGCATTAAATGGTGGTGCTCCACCTGCAAATGATGCTGAACCCAATGGTGAGGATGTGGAGGAGGAGATTCTCAAACCATCGATTTCTGGGAGAACAACCTATGAAAATGGCGATGTTATGGTCACCGTTACTACAAGTGAGATCACTGCTGAAGAAGTGGAGCATCCAAGTGAAAAGTCAGCACCATTACTGCCGGTGTCAAATGGAGAGGCCAAGAAAAAGCATAATATTCCCGTGAGCAAGAAAAAGCCCTTTAAAAAAGCAACAAAAGGTAGATCACGTCCAAAGCTACACAGCAAAAGAGACAGAAGGAAAGGGAAGAAAAATAGCAGAGGGCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25676.p1 GENE.R_Transcript_25676~~R_Transcript_25676.p1 ORF type:complete len:194 (+),score=61.71,Nop25|PF09805.5|7.9e-12,Nop25|PF09805.5|4e+03 R_Transcript_25676:146-727(+)
MEADSEAAVVGQPSANHIKKRSLRNKALSIYFNEKDLKDYVDGFHKRKKKRRKEAQKQQEEAERRRRLEECKRRRLEKEYALNGGAPPANDAEPNGEDVEEEILKPSISGRTTYENGDVMVTVTTSEITAEEVEHPSEKSAPLLPVSNGEAKKKHNIPVSKKKPFKKATKGRSRPKLHSKRDRRKGKKNSRGH*

Click here to download the sequence:
Link to NCBI Protein BLAST