Transcript Information: R_Transcript_256894.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3550233023154
Replicate 20.91686901381214
Replicate 31.3003824836244
Condition 2: 8 Hour
Replicate 10.42770069776848
Replicate 20.78116617785801
Replicate 31.188970127973
Condition 3: 24 Hour
Replicate 11.5037864996313
Replicate 21.2520452645306
Replicate 31.43369244674


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_256894.p1 GENE.R_Transcript_256894~~R_Transcript_256894.p1 ORF type:internal len:229 (+),score=69.31 R_Transcript_256894:1-684(+)
GAAGACCTTGTCAATATTATGTTGCGGTTAGAAGAGCTCCACCAAAATTTCCATTCTAGAATTCGCCAACTCACGAAAGAGAAGGAAGATCTTCTGAACGAATGTGATTTTGCTCAAGTCTCTTCAGCAACTGCCAAATCTGAAGTAGAGATTTTGAAACAGAAATTTCAAAGTGATGTACCAGAGGTGGTTAATAAATTGAACTTGTCCAGTGCTCTTGTCGAGAAGCTTCAAGCAGATCTTGAGCTTGTTGGTAACAAACTGAAGGTTAGCTCAGACGCAGAGGAAGAATATACACGGAGGACAGAAGATCTTTTGGTTGATTTTGCAAAAATGGAGGCTGCCTTACAGGAACTCACTACCAGGAACAGGGATCTTGCTGATGAAATAATGTCCTTGGGAAGTGTTACTGATGAGATGGAACAAAATAAATTGAACATGGATAAAATAACAAAGGAAAACCTCAACCTCATGTCGCTTTTGCAGAGTAAGACTGATGAATCTGACAAGCTCACATTGGAGCTTAATAATTTACAAGGAACTATGGGATGCTTGCAGGATGAATTATCCCTTGAGAGGGGCATTAGAGAGCAACTCGAGGCCGAAGTTTTGAATCTGAATGCCCAGGTGAAAAAGATAGACGAGAAATTTCCCCATCTTGAGCAGCAGAAAGCTGAATTGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_256894.p1 GENE.R_Transcript_256894~~R_Transcript_256894.p1 ORF type:internal len:229 (+),score=69.31 R_Transcript_256894:1-684(+)
EDLVNIMLRLEELHQNFHSRIRQLTKEKEDLLNECDFAQVSSATAKSEVEILKQKFQSDVPEVVNKLNLSSALVEKLQADLELVGNKLKVSSDAEEEYTRRTEDLLVDFAKMEAALQELTTRNRDLADEIMSLGSVTDEMEQNKLNMDKITKENLNLMSLLQSKTDESDKLTLELNNLQGTMGCLQDELSLERGIREQLEAEVLNLNAQVKKIDEKFPHLEQQKAELS

Click here to download the sequence:
Link to NCBI Protein BLAST