Transcript Information: R_Transcript_25745.p1


Annotated TAIR IDAT4G29080.1
Annotated Gene Namephytochrome-associated protein 2
Annotated Gene Symbol(s)PAP2, IAA27
Annotation TypeHomolog
Chromosome Positionchr4:14323665-14325213 | Reverse length=305
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1119.04688505026
Replicate 290.392160983401
Replicate 3101.48021618884
Condition 2: 8 Hour
Replicate 178.13871608165
Replicate 2100.37734091209
Replicate 3107.1078494328
Condition 3: 24 Hour
Replicate 1101.62205846381
Replicate 288.950805157953
Replicate 3119.98002826531


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25745.p1 GENE.R_Transcript_25745~~R_Transcript_25745.p1 ORF type:complete len:272 (+),score=70.51,AUX_IAA|PF02309.12|3.8e-83 R_Transcript_25745:544-1359(+)
ATGTCTAGGCCATTAGAGCATGATTACATAGGATTAACTGAAGTTCCTTCAATGGAGAGCAGTGGTTTAAAGACAGATTTGAGCCTAGGATTACCAGGGTCTGAGTCACCTGATAGGAAGTCTGGGTTTGCTGGTGGTGGGGTTACTCTATTTGGCAAGGAACTTGAAGGAAATGGGGTTTCAATTGGTTCATTAAAGACTTGTTCTCTAGGAGCTAAAAGGGGTTTTTCTGATGCTATTTATGCTTCTGAGAAATGGGTTTTGTCTATTAATGGAAGATCTGAAGCTAATTTGAGTAAAGATGTGGCTGTGCCTTCTTCTCCTAAGACTGTTCTGGAGAATAAGCCTCAAGTTCCTGCTGCTAAGGCACAGGTTGTGGGATGGCCACCAGTTCGTTCATTTCGTAAGAATACGATGGCATCTAACTCCACAAAGAACAATGGTCACGCAGAAGAGAAATCGGTGTCTGCATGCCACTTTGTGAAGGTTAGTATGGATGGTGCTCCATACTTGAGGAAGGTTGATCTCCAAACCTATGCAAACTATCTGGAACTCTCATCTGCACTGGAGAAGATGTTTAGCTGCTTTATAACAGGTCAGTATGGTTCTGATGGGCATACGAGCTGTGATGGACTGAGTAAGAACCATTCAACTGATCATCTCCGTAGTTCTGAATATGTGCTCACCTATGAAGACAAGGACGGTGATTGGATGTTAGTTGGTGATGTCCCTTGGAAGATGTTCACGGAGAACTGCAGAAAACTCCGGATCATGAAGGGTTCAGAAGCCATTGGATTAGCTCCAAAGTGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25745.p1 GENE.R_Transcript_25745~~R_Transcript_25745.p1 ORF type:complete len:272 (+),score=70.51,AUX_IAA|PF02309.12|3.8e-83 R_Transcript_25745:544-1359(+)
MSRPLEHDYIGLTEVPSMESSGLKTDLSLGLPGSESPDRKSGFAGGGVTLFGKELEGNGVSIGSLKTCSLGAKRGFSDAIYASEKWVLSINGRSEANLSKDVAVPSSPKTVLENKPQVPAAKAQVVGWPPVRSFRKNTMASNSTKNNGHAEEKSVSACHFVKVSMDGAPYLRKVDLQTYANYLELSSALEKMFSCFITGQYGSDGHTSCDGLSKNHSTDHLRSSEYVLTYEDKDGDWMLVGDVPWKMFTENCRKLRIMKGSEAIGLAPKCS*

Click here to download the sequence:
Link to NCBI Protein BLAST