Transcript Information: R_Transcript_25762.p1


Annotated TAIR IDAT5G48940.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19839785-19843744 | Forward length=1135
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.210800795599
Replicate 211.044928864824
Replicate 313.063998785306
Condition 2: 8 Hour
Replicate 115.218645227628
Replicate 215.431337728943
Replicate 318.781874878039
Condition 3: 24 Hour
Replicate 126.445321346496
Replicate 218.149640128704
Replicate 325.003662645796


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25762.p1 GENE.R_Transcript_25762~~R_Transcript_25762.p1 ORF type:complete len:1152 (+),score=224.00,Pkinase|PF00069.21|5.7e-41,Pkinase_Tyr|PF07714.13|3.4e-39,LRR_8|PF13855.2|0.00047,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|0.00043,LRR_8|PF13855.2|0.61,LRR_8|PF13855.2|1.3,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|1.4e-05,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|3.8e-07,LRR_8|PF13855.2|0.0057,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|0.039,LRR_8|PF13855.2|52,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.0092,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.14,LRR_4|PF12799.3|0.016,LRR_4|PF12799.3|0.0084,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.06,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|0.55,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|5.2,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|2.9,LRR_1|PF00560.29|25,LRR_1|PF00560.29|9.4e+03,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|3.9e+03,LRR_1|PF00560.29|5.3e+03,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|41,LRR_1|PF00560.29|22,LRR_1|PF00560.29|63,LRR_1|PF00560.29|28,LRR_1|PF00560.29|5.9e+02,LRR_1|PF00560.29|95,LRR_1|PF00560.29|10 R_Transcript_25762:421-3876(+)
ATGCCAAAGCCAATGCCAGCTCCTATGCCAAGGCAACCCTTGAAGCCCCACCACAACCACCACTTGAGCCGCCTCCATAACCATAACCATCATCATCTTATCCTTTGCATAACTCTTATTCTCTCTCCATTCTTCACCTCTGCCCTTGACAATAGTAACCATGAAGTTCTGGTCTTACATTCATGGCTTCACAGTTCTTCCCAGCCTCCACCCCCTGCTTTCTCAGACTGGAACTCTTGGGATCAATACCCTTGTAAATGGTCTTTCATAACTTGCTCTTCTGATAACTTTGTTACTGAAATCAACATTGACTCAGTTCAGTTAGCACTTCCTTTTCCTTCAAATATATCCTCCTTTCCCCAACTACAAAAGCTCACCATTTCCAGTTCTAATCTCACTGGTTCTATCCCAGATAGCATTGGGGATTCTACCCAACTCACTTTACTTGATCTTAGCTCAAATAATCTTGTGGGTAGTATCCCCAGTTCCATTGGGAAGCTTATAAACCTACAAGACTTGATTTTAAACTCCAATCAGCTCACTGGGAAAATCCCAGCTGAGCTTGGTGGTTGCCTTAGCCTAGAAAACATCTTGATATTTGATAACAACTTGGATGGTGAGCTCCCAGCTGAGCTTGGGAAACTCACAAACCTGCAGTCTTTGAGGGCAGGGGGAAACAAGGACATCTCTGGAGCAATACCAGAAGAGCTTGGGCAATGTCAGAACATGACCGTGCTCGGATTGGCTGACACGAAGATTTCAGGCTCGATTCCAAGCTCATTAGGCAAGCTAAGCAAGCTCCAGACTTTGTCAGTTTACACTACAATGCTCTCAGGAGAGATCCCACCAGAAATAGGTAACTGCTCTGAGCTTGTGAACTTGTATCTTTATCAGAATAGCCTCTCTGGGTCAATCCCAAAAGAACTAGGAAAGTTGCAAAAGCTTGAGAAGTTGCTGCTATGGCAGAATAATTTGTCTGGGGCTATCCCAGAAGAGATTGGAAATTGTTCGAGTTTGGCAATTATTGATCTTTCATTAAATTCTTTCTCTGGAAGTATACCTTTATCATTTGGGAAACTGCCATACCTCCTAGAGCTGATGCTAAGCAGTAACAACATATCTGGCTCAATCCCATCTGGTCTTTCCAATGCCACAAATTTAGTGCAATTGCAGGTGGATAATAATCAAATTACAGGCTCAATCCCAGCTGAGTTAGGGAGGTTAAGAGGGTTGCAAGTCCTCTTTGCCTGGCAGAACAAGCTTGAAGGAAGTATCCCTCCTGCACTGGCTAATTGCAGAAGCCTCCAAGCTTTGGATTTGTCACATAACTCACTCACTGGAAGCTTGCCATCAGGTCTATTTCAGCTCCAAAACCTCACAAAACTGTTGCTGATTTCCAATCACATTTCTGGTTCGATCCCACCAGAGATTGGGAAATGCAAGTCCCTCATTCGACTTCGTCTTTTTAACAATAGGATCACTGGGGAAATTCCAAAAGAAATTGGTTTCCTTGGTAGTCTTAGTTTCCTTGATATATCTAAAAATCGCCTTTCTGGGTCAATCCCAGATGAGATAAGCAGGTGCAAAGATTTACAGATGCTAAACCTGAGTAACAACACACTCGGGGGCTCCCTTCCCAGTTCACTAACATCATTGAGTAAGCTTCAGGCTCTAGATTTGTCAAAGAATCAGTTCGTGGGTCCACTTCCAGAGAACTTTGGCCAACTAGAGTCACTCAATTCTCTTGTACTTCGAAGGAACTCTTTCTCTGGATCAATTCCATCATCATTGGGAAGCTGTTTGAATCTTCAACTGATAGACTTAAGCAGCAATGAATTTTCAGGGGGCATCCCAGAGGAACTTTTCCAAATCGAAGGTCTTGACATCGCTCTCAATTTGAGCTGCAATATGCTTACTGGAGAGATACCCCCTCAGATTTCTGCCCTTAAGAAAATATCCATACTTGACCTTTCCCACAATAGCTTTGAAGGCAATTTACTGCAGCTCTCTGAGTTGGACAATCTGGTGTCCCTCAATGTCTCCTATAACAATTTCACAGGTTTTTTACCAGACAACAAGCTATTTAGACAGCTATCATCAGCAGAGTTGGAAGGAAACAAAGGGCTGTGTTCACAAAATCATGATTCATGTTTTGTAGGCAATGGTGCAGGACGAGACAAGGCGAACAAAAGGAGATCAGAAAGGCTTAAATTAGCCATTGGCTTGCTTGTAGCTGTGACTATCATACTGGTGATTCTAGGTGCCATGGCAGTTGTTCGAGCAAGAAAAATGGTAAAAAATGACAATGATTCCGAGATTGGGATGGATGCCTGGCCATGGAAATTCACTCCGTTCCAGAAGTTGAACTTTTCCATAGATGAAGTTTTAAAATGCCTGGTGGAGGGTAATATTATTGGAAAGGGATGCTCAGGGATCGTTTACCGTGCAGAAATGGACAATGGGGAAGTGATTGCAGTGAAAAAGCTATGGCCAACAGCACAGGGGGCCAAACATGATGTTCAGAGAGACAGATTGAGGGATGATGGGCGCGACTCCTTCTCAGCAGAAGTGAAGACCCTCGGGTCCATTCGCCACAAGAACATCGTCAAGTTCCTAGGTTGCTGTTGGAATAAGAACACAAAGTTGCTCATGTATGACTACATGCCTAATGGAAGCTTAGGAAGTCTCCTACATGAAAGTGGAAGCTGCTTGGACTGGGATTTGAGGTACAAGATTGTCCTTGGAGCAGCTCAAGGATTAGCTTATCTGCATCACGATTGTGTTCCTCCGATAGTTCACAGAGATATCAAGGCCAACAACATTCTTATTGGCCTCGATTTCGAGCCCTACATTGCTGACTTTGGCCTAGCCAAGCTCGTTGATGATGGGGATTTTGCTCGATCATCCAGCACAGTTGCAGGATCCTATGGCTACATAGCACCTGAATATGGATACATGATGAAAATCACAGAAAAGAGTGACGTGTACAGCTATGGTGTTGTCGTGTTAGAATTACTAACAGGGAAGCAACCAATCGACCCAACCATACCCGATGGGCTACACATTGTGGACTGGGTTAGACAGAAAAAAGGCGGAATTGAAGTACTGGACCCAAAGCTACAAGGCCGACCAGAATCAGAAATCGAAGATATGATGCAAACATTAGGGGTGGCATTGCTTTGTGTAGCTCCATCACCAGATGAACGACCCACCATGAAAGACGTGGCAGCAATGCTCAAGGAAATACGACAGGATAGGGGCACAGAGTGCATGAAGGTCGACACACTACTCAAAGGAACGCCGACAGCAAAAGAGCAACAAGAGGGAAACAGTAAGAGCTCTACAGGAGGGCCATCTACAGCAATGCATAACCTATACCCACGAAGCAACAACACCAGCTTTTCAGCTTCATCGCTGCTTTATTCTTCTTCCAATGGCAATGTATCTTACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25762.p1 GENE.R_Transcript_25762~~R_Transcript_25762.p1 ORF type:complete len:1152 (+),score=224.00,Pkinase|PF00069.21|5.7e-41,Pkinase_Tyr|PF07714.13|3.4e-39,LRR_8|PF13855.2|0.00047,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|0.00043,LRR_8|PF13855.2|0.61,LRR_8|PF13855.2|1.3,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|1.4e-05,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|3.8e-07,LRR_8|PF13855.2|0.0057,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|0.039,LRR_8|PF13855.2|52,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.0092,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.14,LRR_4|PF12799.3|0.016,LRR_4|PF12799.3|0.0084,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.06,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|0.55,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|5.2,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|2.9,LRR_1|PF00560.29|25,LRR_1|PF00560.29|9.4e+03,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|3.9e+03,LRR_1|PF00560.29|5.3e+03,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|41,LRR_1|PF00560.29|22,LRR_1|PF00560.29|63,LRR_1|PF00560.29|28,LRR_1|PF00560.29|5.9e+02,LRR_1|PF00560.29|95,LRR_1|PF00560.29|10 R_Transcript_25762:421-3876(+)
MPKPMPAPMPRQPLKPHHNHHLSRLHNHNHHHLILCITLILSPFFTSALDNSNHEVLVLHSWLHSSSQPPPPAFSDWNSWDQYPCKWSFITCSSDNFVTEINIDSVQLALPFPSNISSFPQLQKLTISSSNLTGSIPDSIGDSTQLTLLDLSSNNLVGSIPSSIGKLINLQDLILNSNQLTGKIPAELGGCLSLENILIFDNNLDGELPAELGKLTNLQSLRAGGNKDISGAIPEELGQCQNMTVLGLADTKISGSIPSSLGKLSKLQTLSVYTTMLSGEIPPEIGNCSELVNLYLYQNSLSGSIPKELGKLQKLEKLLLWQNNLSGAIPEEIGNCSSLAIIDLSLNSFSGSIPLSFGKLPYLLELMLSSNNISGSIPSGLSNATNLVQLQVDNNQITGSIPAELGRLRGLQVLFAWQNKLEGSIPPALANCRSLQALDLSHNSLTGSLPSGLFQLQNLTKLLLISNHISGSIPPEIGKCKSLIRLRLFNNRITGEIPKEIGFLGSLSFLDISKNRLSGSIPDEISRCKDLQMLNLSNNTLGGSLPSSLTSLSKLQALDLSKNQFVGPLPENFGQLESLNSLVLRRNSFSGSIPSSLGSCLNLQLIDLSSNEFSGGIPEELFQIEGLDIALNLSCNMLTGEIPPQISALKKISILDLSHNSFEGNLLQLSELDNLVSLNVSYNNFTGFLPDNKLFRQLSSAELEGNKGLCSQNHDSCFVGNGAGRDKANKRRSERLKLAIGLLVAVTIILVILGAMAVVRARKMVKNDNDSEIGMDAWPWKFTPFQKLNFSIDEVLKCLVEGNIIGKGCSGIVYRAEMDNGEVIAVKKLWPTAQGAKHDVQRDRLRDDGRDSFSAEVKTLGSIRHKNIVKFLGCCWNKNTKLLMYDYMPNGSLGSLLHESGSCLDWDLRYKIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDDGDFARSSSTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLELLTGKQPIDPTIPDGLHIVDWVRQKKGGIEVLDPKLQGRPESEIEDMMQTLGVALLCVAPSPDERPTMKDVAAMLKEIRQDRGTECMKVDTLLKGTPTAKEQQEGNSKSSTGGPSTAMHNLYPRSNNTSFSASSLLYSSSNGNVSYK*

Click here to download the sequence:
Link to NCBI Protein BLAST