Transcript Information: R_Transcript_257648.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15325766727225
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.16757523523872
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_257648.p1 GENE.R_Transcript_257648~~R_Transcript_257648.p1 ORF type:internal len:137 (+),score=16.32,gag_pre-integrs|PF13976.2|6e-18 R_Transcript_257648:1-408(+)
CTCGTTTCTCTTGGTACCCTCGAATCTTTGGGATGTCATTACTCCGCTCAAGGTGGAGTCCTTAAAGTGTCTAAGGGGTCACTTGTTTTGATGAAAGGCTCTAGAGTTGGGTCTTTATATGTGTTACAAGGTTCTACCGTCGCCGGTTCCACCGCCGTTGCCACCACCTCCAATGCTAATGACCCCAAACTATGGCATATGCGTTTGGGTCATATAGGTGAGAAAGGTATGGCTATTCTTTGTAAACGAGGTTTGCTTGGCTCACTTACTAACTGTGATATTGATTTTTGTGAGCATTGTGTTTATGGCAAGCAAAAGAGAGTAAGTTTCTCACCGGGCATTCATAGAACCAAGGCAACACTTGATTATGTCCACTCTGACTTGTGGGGTCCTTCACAAGTTTCTACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_257648.p1 GENE.R_Transcript_257648~~R_Transcript_257648.p1 ORF type:internal len:137 (+),score=16.32,gag_pre-integrs|PF13976.2|6e-18 R_Transcript_257648:1-408(+)
LVSLGTLESLGCHYSAQGGVLKVSKGSLVLMKGSRVGSLYVLQGSTVAGSTAVATTSNANDPKLWHMRLGHIGEKGMAILCKRGLLGSLTNCDIDFCEHCVYGKQKRVSFSPGIHRTKATLDYVHSDLWGPSQVST

Click here to download the sequence:
Link to NCBI Protein BLAST