Transcript Information: R_Transcript_257906.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.24898627821905
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12477069145491
Replicate 20.23973107489758
Replicate 30.11895491677662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_257906.p1 GENE.R_Transcript_257906~~R_Transcript_257906.p1 ORF type:internal len:184 (+),score=30.69,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.2e-20,PPR_2|PF13041.2|7.2e-16,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|0.0022,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.9e-12,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|3.5e-07,PPR|PF01535.16|8.1e+02,PPR|PF01535.16|5.7e-09,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.015,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|3.6e-07,PPR_3|PF13812.2|7e-06,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.6e-05,PPR_3|PF13812.2|0.054,MRP-S27|PF10037.5|6.4,MRP-S27|PF10037.5|0.0003 R_Transcript_257906:2-550(+)
AGCCTATTCCAAGAAATGTCTCTTGAGGGCCTCTCACCTAATGTTTGTACCTACAATACTCTCATTGATGGCTTGTGCAAGAGCAAAAGACTTGAATCAGCTTTCCGACTGTTCGAGGAAATAAAAGCTTATGGACTACATCCAAATATTGTCACATATGCTTCGTTGGTTGACGGTTTGTGTAAAGATGCACGAATTGAAGAGGCTACGGAACTGCTTAGGGACATGAAGAACAATGGAGTGGTTCCTAATAAATTCATCTATGCCATTTTTCTTAATGCTCTGTGCGAAGCTGGTAGACTTACAGAAGCAGAGGACATTTTTTCTTTCCTTTTAACCAAGGGGTCAAAACCAGATGTGCACATCTATACTATAATGATCAAAGGACTTTGCAAACAAAGGAAGCTGCATGCTGCCATTGAACTATTATCAAAAATGGAGGAAAATGGATGTGCACCTGATGATTGCACTTACAACACAATTATTAGAGGATTTGTTCATGGGAATGATCTCAAAAAAGCTTTGGAGCTTGTCACCATTATGACTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_257906.p1 GENE.R_Transcript_257906~~R_Transcript_257906.p1 ORF type:internal len:184 (+),score=30.69,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.2e-20,PPR_2|PF13041.2|7.2e-16,PPR_2|PF13041.2|2.4e-11,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|0.0022,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|2.4e-15,PPR_1|PF12854.3|2.9e-12,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|3.5e-07,PPR|PF01535.16|8.1e+02,PPR|PF01535.16|5.7e-09,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.015,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|3.6e-07,PPR_3|PF13812.2|7e-06,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|2.6e-05,PPR_3|PF13812.2|0.054,MRP-S27|PF10037.5|6.4,MRP-S27|PF10037.5|0.0003 R_Transcript_257906:2-550(+)
SLFQEMSLEGLSPNVCTYNTLIDGLCKSKRLESAFRLFEEIKAYGLHPNIVTYASLVDGLCKDARIEEATELLRDMKNNGVVPNKFIYAIFLNALCEAGRLTEAEDIFSFLLTKGSKPDVHIYTIMIKGLCKQRKLHAAIELLSKMEENGCAPDDCTYNTIIRGFVHGNDLKKALELVTIMTG

Click here to download the sequence:
Link to NCBI Protein BLAST