Transcript Information: R_Transcript_258643.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15735311167861
Replicate 20.90501294897837
Replicate 30
Condition 2: 8 Hour
Replicate 10.21108504264867
Replicate 20.19276622276884
Replicate 30.78239700949944
Condition 3: 24 Hour
Replicate 10.19791213127331
Replicate 20.19013154216015
Replicate 30.18868710936981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_258643.p1 GENE.R_Transcript_258643~~R_Transcript_258643.p1 ORF type:3prime_partial len:116 (-),score=35.45 R_Transcript_258643:3-347(-)
ATGAGTTTTAATTATCCAGGGAATAGCCCATTTTTGCAGTCACCATATACTCCGGTTGATGAATCTAGATCACATTCTGGCCAGAAGATAAGACAGAGAAGGCATTCAATGGATAGCAGGGATCTGAGTGCCGATTTTGAAGCTCAAGAGGTTGATATGGATACGGATGAAGAAGATTCTGCAAGTCATAGATCAAGGAAGAAAGGCGGCAGATCTTCCAAAAAGCAGTCTGGAACTGTTGTAATTCGTAATATTAATTACATTGCTGCATCAAAGGAAGGTGGTTCCGATAGTGATGCAGAATCTTGTTCAGGTTCTGGAAGTGATGATGAGGAGGAAAATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_258643.p1 GENE.R_Transcript_258643~~R_Transcript_258643.p1 ORF type:3prime_partial len:116 (-),score=35.45 R_Transcript_258643:3-347(-)
MSFNYPGNSPFLQSPYTPVDESRSHSGQKIRQRRHSMDSRDLSADFEAQEVDMDTDEEDSASHRSRKKGGRSSKKQSGTVVIRNINYIAASKEGGSDSDAESCSGSGSDDEEENV

Click here to download the sequence:
Link to NCBI Protein BLAST