Transcript Information: R_Transcript_258818.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5053988416263
Replicate 20
Replicate 30.23615193398095
Condition 2: 8 Hour
Replicate 10.50486319478856
Replicate 20
Replicate 30.56139001918723
Condition 3: 24 Hour
Replicate 10.23667842502788
Replicate 20.90949521198257
Replicate 31.1282322003555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_258818.p1 GENE.R_Transcript_258818~~R_Transcript_258818.p1 ORF type:5prime_partial len:97 (-),score=13.12,RVT_1|PF00078.23|2.7e-16 R_Transcript_258818:7-297(-)
GGGTACTTTAAAGGTAGGAGAGGTGTCAGGCAAGGTGACCCATTCTCTCCCTACCTCTTTGTCTTAGTCATGAAGTATTTGTCTAGAATGCTAAGGGATTTGAAGCCTGGGAAAGACTATGGGAGACACCCTAAATGTGCAGCATTAAATTTAAATCATCTTTTATTTGCTGATGATCTTTTGGTATTTGTTAGAGGAGATCAACATTCTATGCAGACAGTTTGTAATACCTTGAGGAAGTTTGCAGATTACTCAAGGTTAGAACCTAGTCCTCATAAGACCTCAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_258818.p1 GENE.R_Transcript_258818~~R_Transcript_258818.p1 ORF type:5prime_partial len:97 (-),score=13.12,RVT_1|PF00078.23|2.7e-16 R_Transcript_258818:7-297(-)
GYFKGRRGVRQGDPFSPYLFVLVMKYLSRMLRDLKPGKDYGRHPKCAALNLNHLLFADDLLVFVRGDQHSMQTVCNTLRKFADYSRLEPSPHKTSI*

Click here to download the sequence:
Link to NCBI Protein BLAST