Transcript Information: R_Transcript_258820.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.357158421449
Replicate 22.4382800483443
Replicate 31.9212102499999
Condition 2: 8 Hour
Replicate 12.8435198003253
Replicate 22.7410113224679
Replicate 31.7566074793923
Condition 3: 24 Hour
Replicate 13.4066423628206
Replicate 21.8497959069516
Replicate 33.9539079434395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_258820.p1 GENE.R_Transcript_258820~~R_Transcript_258820.p1 ORF type:complete len:155 (+),score=13.30,zf-RVT|PF13966.2|1.1e-13,zf-RVT|PF13966.2|1.5e+03 R_Transcript_258820:959-1423(+)
ATGATCCCAAAGCATCAAGTTATTATGTGGATGGCTTGGAAAAGAGCCTTGCCTACTGTAGATAAGCTGTGCTCTAGGGGTATTATGTTGGCAAACAGATGTGAACTCTGCCAGGCAGCACTGGAATCACATGAGCACTTGCTCTTTCAGTGCTCTACTGCTGTTGCAATATGGGATAAAGTGCTCAGATGGCTTGGATGTACCAGACGTGGATTCAGTCTATGGAGCGAACTGAGATGGTTTGCTAAGAATATTAGAGGCAAAGGGTGGGAGAAGAAGTGTCGCAGGCTGGCTCTGAGTGCTACTATATATGAAATATGGCAAGAACGAAATTGTCGTATCTTTTCAGGACTGAGTAGACAAGTGAAGCACATTATTGCTAGTATCCAGTTTTTGGTATGTAGTAGACTTCTCTATACCTATACAGAGAATAGCCATACTATAGAGAGGAGGCTGCTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_258820.p1 GENE.R_Transcript_258820~~R_Transcript_258820.p1 ORF type:complete len:155 (+),score=13.30,zf-RVT|PF13966.2|1.1e-13,zf-RVT|PF13966.2|1.5e+03 R_Transcript_258820:959-1423(+)
MIPKHQVIMWMAWKRALPTVDKLCSRGIMLANRCELCQAALESHEHLLFQCSTAVAIWDKVLRWLGCTRRGFSLWSELRWFAKNIRGKGWEKKCRRLALSATIYEIWQERNCRIFSGLSRQVKHIIASIQFLVCSRLLYTYTENSHTIERRLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST