Transcript Information: R_Transcript_258990.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82551079694708
Replicate 20.5275452365904
Replicate 30.5755461707576
Condition 2: 8 Hour
Replicate 10.49217818989438
Replicate 20.22473248081593
Replicate 30.45607061860269
Condition 3: 24 Hour
Replicate 10.80756105826095
Replicate 20
Replicate 30.32996539728991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_258990.p2 GENE.R_Transcript_258990~~R_Transcript_258990.p2 ORF type:complete len:199 (+),score=31.13,RVT_1|PF00078.23|3.8e-29 R_Transcript_258990:1709-2305(+)
ATGATGAAAATTGATTTGCAAAAGGCCTACGATAGCCTAGAATTGGAATTCTTACATCAGTTGATGGTAGAACTTGGATTCCCTCCCCTTTTTCTGCAGTGGATTATGTGTTGTATAACTACAGTGAGCTATGTGCTAAATGTCAATGGTGAACTACAAAAGCCTTTTGAGGCAAAAAGAGGGCTACGCCAAGGTGATCCCCTCTCTCCATCTCTATTTGTCATTGCTATGGAATACCTGTCTAGGTGTATGGCTGGTTTACATGATGAAAAGGAGTTCAAATATCATCCCAAATGCCAGATTATGAAGCTTACTCACTTATGCTTCGCGGATGATCTAATGCTCTTCACAAAGGGAGATGTTGGCTCTGTGAGGCTTATTCATGAAGCCTTCAATAATTTCTCTAAAGCTTCAGGGCTAAGCGCAAATCTGGGGAAGAGCTCAGTGTTCTTTGGTGGTGTTCCTGAGGAAGTGCAAAGAGATATTCTATATAACTTGGGTTACTCAGCAGGATGTCTTCGTATACGATACCTTGGTATCCCTCTCTCACACAAGAAATTAAATCACTATACAACAATGCAAACCAATACTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_258990.p2 GENE.R_Transcript_258990~~R_Transcript_258990.p2 ORF type:complete len:199 (+),score=31.13,RVT_1|PF00078.23|3.8e-29 R_Transcript_258990:1709-2305(+)
MMKIDLQKAYDSLELEFLHQLMVELGFPPLFLQWIMCCITTVSYVLNVNGELQKPFEAKRGLRQGDPLSPSLFVIAMEYLSRCMAGLHDEKEFKYHPKCQIMKLTHLCFADDLMLFTKGDVGSVRLIHEAFNNFSKASGLSANLGKSSVFFGGVPEEVQRDILYNLGYSAGCLRIRYLGIPLSHKKLNHYTTMQTNTG*

Click here to download the sequence:
Link to NCBI Protein BLAST