Transcript Information: R_Transcript_258993.p3


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1154587250106
Replicate 20.93316890739102
Replicate 30.63629826655979
Condition 2: 8 Hour
Replicate 10.68016291520126
Replicate 20.99381697071936
Replicate 30.40336912489749
Condition 3: 24 Hour
Replicate 10.89280361441071
Replicate 20
Replicate 30.97278687497321


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_258993.p3 GENE.R_Transcript_258993~~R_Transcript_258993.p3 ORF type:complete len:180 (+),score=24.23,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|5.7e+03 R_Transcript_258993:2650-3189(+)
ATGAAAATAAAGGAGATTTACAAAAGGCTGCAGGGCGACTTTGTGAAGGTAGAGTGGAAGAACCTGATCTGTAACAATGCTGCAAGGCCCAAAGCGTGCTTCTCTTTGTGGCTGCTGCTGCTACAAAGGCATTCTACTAAAGATAGGCTCTACAGGTGGGGGATAAATTGTGACAGAACCTGTGAACTCTGCAAAACTGAGGAGGAGTCTCATGAACATCTTATCTTTACTTGCAGCTATACCAGGCAGATATGGGTGGGAGTCTTGACAGGCCTTCGATTAAAAACTGGAGCCGTACCTCTCTCTTGGCATCAAGGTCTTCAATGGATGATTAAACATGGAAAAGGAAAATCTTCAACTGCGAAGATGTTTCGAATGATACTTGCTGAACTTTGGTATGCTATCTGGAATGAAAGGAATAATCGAGTCTTTGTGAAGAAGGAGCAAACACAGAGTAGTCTAATTAAAACTGCTATGTATGCTGTGGCCATCAGAGGCTATATGTACCCAAAGCTTAGTGAGTGTTTGAATAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_258993.p3 GENE.R_Transcript_258993~~R_Transcript_258993.p3 ORF type:complete len:180 (+),score=24.23,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|5.7e+03 R_Transcript_258993:2650-3189(+)
MKIKEIYKRLQGDFVKVEWKNLICNNAARPKACFSLWLLLLQRHSTKDRLYRWGINCDRTCELCKTEEESHEHLIFTCSYTRQIWVGVLTGLRLKTGAVPLSWHQGLQWMIKHGKGKSSTAKMFRMILAELWYAIWNERNNRVFVKKEQTQSSLIKTAMYAVAIRGYMYPKLSECLNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST