Transcript Information: R_Transcript_25901.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value4E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6021348134089
Replicate 25.2714115938791
Replicate 38.3828912054005
Condition 2: 8 Hour
Replicate 14.7929778194608
Replicate 28.8492000477883
Replicate 310.504761890947
Condition 3: 24 Hour
Replicate 110.550822045073
Replicate 27.1327645773782
Replicate 38.4756643681177


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25901.p1 GENE.R_Transcript_25901~~R_Transcript_25901.p1 ORF type:complete len:235 (+),score=59.70,EF-hand_1|PF00036.28|3.3,EF-hand_1|PF00036.28|9.9e-06,EF-hand_1|PF00036.28|5.6e-05,EF-hand_1|PF00036.28|2.2e-05,EF-hand_5|PF13202.2|3.3,EF-hand_5|PF13202.2|0.0083,EF-hand_5|PF13202.2|0.027,EF-hand_5|PF13202.2|3.2e-07,EF-hand_6|PF13405.2|0.17,EF-hand_6|PF13405.2|0.004,EF-hand_6|PF13405.2|0.001,EF-hand_6|PF13405.2|0.022,EF-hand_7|PF13499.2|0.00036,EF-hand_7|PF13499.2|3e-10,EF-hand_8|PF13833.2|1.6e+02,EF-hand_8|PF13833.2|0.042,EF-hand_8|PF13833.2|39,EF-hand_8|PF13833.2|0.0023 R_Transcript_25901:534-1238(+)
ATGGGTTGTGGGATTTCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTATTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACGTTGAGTGTCTTCCACCCCAAAACTCCTGAAACTAAGAAAATTGTAGATGCATTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCTCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTAGTTGCATGTATTGTGGATAAGACATTCAAGGAAGTCGATTTGAAGGGTGACGGCAAAATTGATATGGAAGAGTGGGAAAAATATGTAGCCAAAAATCCAGCAATGCTTAAGAACATGACTCTTCCGTATCTAATGGACATAAACCTTGCATTTCCTAGTTTTGTGGTGAACAAAGAAGCAGAATGCTTACAAAGGAGTACCCGAAAGGACGAAGATGAAGACGACATTTCAGTCTCTTCCCATTACCTGGGTATTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25901.p1 GENE.R_Transcript_25901~~R_Transcript_25901.p1 ORF type:complete len:235 (+),score=59.70,EF-hand_1|PF00036.28|3.3,EF-hand_1|PF00036.28|9.9e-06,EF-hand_1|PF00036.28|5.6e-05,EF-hand_1|PF00036.28|2.2e-05,EF-hand_5|PF13202.2|3.3,EF-hand_5|PF13202.2|0.0083,EF-hand_5|PF13202.2|0.027,EF-hand_5|PF13202.2|3.2e-07,EF-hand_6|PF13405.2|0.17,EF-hand_6|PF13405.2|0.004,EF-hand_6|PF13405.2|0.001,EF-hand_6|PF13405.2|0.022,EF-hand_7|PF13499.2|0.00036,EF-hand_7|PF13499.2|3e-10,EF-hand_8|PF13833.2|1.6e+02,EF-hand_8|PF13833.2|0.042,EF-hand_8|PF13833.2|39,EF-hand_8|PF13833.2|0.0023 R_Transcript_25901:534-1238(+)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSIVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVDAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELVACIVDKTFKEVDLKGDGKIDMEEWEKYVAKNPAMLKNMTLPYLMDINLAFPSFVVNKEAECLQRSTRKDEDEDDISVSSHYLGID*

Click here to download the sequence:
Link to NCBI Protein BLAST