Transcript Information: R_Transcript_25902.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value7E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.50290539919277
Replicate 30.82299656034081
Condition 2: 8 Hour
Replicate 10.29324389158378
Replicate 20.53558998422001
Replicate 30.54346139581997
Condition 3: 24 Hour
Replicate 10
Replicate 20.66033709253225
Replicate 30.39319229976462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25902.p1 GENE.R_Transcript_25902~~R_Transcript_25902.p1 ORF type:complete len:167 (+),score=41.55,EF-hand_1|PF00036.28|2.1,EF-hand_1|PF00036.28|5.9e-06,EF-hand_1|PF00036.28|3.4e-05,EF-hand_6|PF13405.2|0.098,EF-hand_6|PF13405.2|0.0024,EF-hand_6|PF13405.2|0.0006,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|0.0051,EF-hand_5|PF13202.2|0.017,EF-hand_7|PF13499.2|0.0002,EF-hand_7|PF13499.2|0.002,EF-hand_8|PF13833.2|1e+02,EF-hand_8|PF13833.2|0.022,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|8.8 R_Transcript_25902:73-573(+)
ATGGGTTGTGGGATTTCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTATTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACGTTGAGTGTCTTCCACCCCAAAACTCCTGAAACTAAGAAAATTGTAGATGCATTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCTCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTAGTTGCATGTATTGTGGATAAGGCATGGAATTGCACTTCTTTTTACTTAATTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25902.p1 GENE.R_Transcript_25902~~R_Transcript_25902.p1 ORF type:complete len:167 (+),score=41.55,EF-hand_1|PF00036.28|2.1,EF-hand_1|PF00036.28|5.9e-06,EF-hand_1|PF00036.28|3.4e-05,EF-hand_6|PF13405.2|0.098,EF-hand_6|PF13405.2|0.0024,EF-hand_6|PF13405.2|0.0006,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|0.0051,EF-hand_5|PF13202.2|0.017,EF-hand_7|PF13499.2|0.0002,EF-hand_7|PF13499.2|0.002,EF-hand_8|PF13833.2|1e+02,EF-hand_8|PF13833.2|0.022,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|8.8 R_Transcript_25902:73-573(+)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSIVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVDAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELVACIVDKAWNCTSFYLIG*

Click here to download the sequence:
Link to NCBI Protein BLAST