Transcript Information: R_Transcript_25907.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value5E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.174427992125
Replicate 22.2170006650749
Replicate 33.5569468317007
Condition 2: 8 Hour
Replicate 12.5854640006408
Replicate 23.33329915645
Replicate 33.3822876932398
Condition 3: 24 Hour
Replicate 15.9889931898358
Replicate 24.1096755696728
Replicate 35.5738875289614


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25907.p1 GENE.R_Transcript_25907~~R_Transcript_25907.p1 ORF type:complete len:161 (+),score=40.42,EF-hand_1|PF00036.28|2,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|8e-05,EF-hand_6|PF13405.2|0.092,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.00063,EF-hand_7|PF13499.2|0.00018,EF-hand_7|PF13499.2|0.0031,EF-hand_5|PF13202.2|2.1,EF-hand_5|PF13202.2|0.0048,EF-hand_5|PF13202.2|0.19,EF-hand_8|PF13833.2|98,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|1.2,EF-hand_8|PF13833.2|91 R_Transcript_25907:536-1018(+)
ATGGGTTGTGGGATTTCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTATTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACATTGAGTGTCTTCCACCCTAAAACTCCTGAAACAAAGAAAATTGTGTATGCGTTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCTCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTGCATGTATTGTGGATAAGACATTCAAGGAAGTCGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25907.p1 GENE.R_Transcript_25907~~R_Transcript_25907.p1 ORF type:complete len:161 (+),score=40.42,EF-hand_1|PF00036.28|2,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|8e-05,EF-hand_6|PF13405.2|0.092,EF-hand_6|PF13405.2|0.0023,EF-hand_6|PF13405.2|0.00063,EF-hand_7|PF13499.2|0.00018,EF-hand_7|PF13499.2|0.0031,EF-hand_5|PF13202.2|2.1,EF-hand_5|PF13202.2|0.0048,EF-hand_5|PF13202.2|0.19,EF-hand_8|PF13833.2|98,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|1.2,EF-hand_8|PF13833.2|91 R_Transcript_25907:536-1018(+)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSIVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVYAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELHVLWIRHSRKSI*

Click here to download the sequence:
Link to NCBI Protein BLAST