Transcript Information: R_Transcript_259388.p1


Annotated TAIR IDAT1G53850.1
Annotated Gene Name20S proteasome alpha subunit E1
Annotated Gene Symbol(s)PAE1, ATPAE1
Annotation TypeOrtholog
Chromosome Positionchr1:20104131-20105792 | Reverse length=237
E-Value2.1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21991519222553
Replicate 20.25296747489516
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.43738820772017
Condition 3: 24 Hour
Replicate 10
Replicate 20.26572601072985
Replicate 30.52741457076861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_259388.p1 GENE.R_Transcript_259388~~R_Transcript_259388.p1 ORF type:3prime_partial len:83 (+),score=9.02,Proteasome|PF00227.22|5e-11 R_Transcript_259388:1938-2183(+)
ATGAAATGTTCAGCCACATTCATCACTTCTATTTGGTCGATGTCTATTCTATGGCTGAGCTGCACAATTTTTGCTTGGGAAGTCTGTTGTTTGAAATGTTATTTCAAAGCACCATTCTCTTCTAATTTCTTTCAGGAGCCGAGCAGTGTTGAAAAAATCATGGAAATTGATGACCATATAGGATGTGCCATGAGTGGATGGATTGCTGATGCTCGCACACTTGTGGAGCATGCAAGAGTAGAGACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_259388.p1 GENE.R_Transcript_259388~~R_Transcript_259388.p1 ORF type:3prime_partial len:83 (+),score=9.02,Proteasome|PF00227.22|5e-11 R_Transcript_259388:1938-2183(+)
MKCSATFITSIWSMSILWLSCTIFAWEVCCLKCYFKAPFSSNFFQEPSSVEKIMEIDDHIGCAMSGWIADARTLVEHARVET

Click here to download the sequence:
Link to NCBI Protein BLAST