Transcript Information: R_Transcript_25949.p1


Annotated TAIR IDAT5G02530.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:564332-565776 | Reverse length=292
E-Value2.3E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1166.55826871181
Replicate 2153.53544679418
Replicate 3156.14759461377
Condition 2: 8 Hour
Replicate 1127.32649772567
Replicate 2139.4760004844
Replicate 3156.48200988992
Condition 3: 24 Hour
Replicate 1191.98466294168
Replicate 2177.72862789324
Replicate 3181.48555136219


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_25949.p1 GENE.R_Transcript_25949~~R_Transcript_25949.p1 ORF type:complete len:240 (+),score=55.36,RRM_1|PF00076.18|1.4e-14,RRM_6|PF14259.2|1.1e-11,RRM_5|PF13893.2|3.2e-06,FoP_duplication|PF13865.2|1.6e+02,FoP_duplication|PF13865.2|2.6e-06 R_Transcript_25949:260-979(+)
ATGGAGAATCGTTTAAACATGTCACTCGACGATCTCATTAAGATGAATAAATCTTCTTCAGGCCGTGGTGGTGGTAGAGGTCGAGGCCGCTCCGGTCCCGGTCCTTCCCGCCGGTTCGCTAATCGAGCCGCCAACCGGTCCGCCCCCTACTCTATGTCTAAGGCACCGGATACGTTTTGGCAGCATGATATGTATGCTAATCAAGGTGGTGGTATTGGTATTGGTGGTGGTGGTGGAGCTTCTTCGATTGAGACTGGAACTAAGCTTTACATATCTAACTTGGATTACGGCGTTTCTAATGATGATATTAAGGAGCTCTTTTCAGAAGTTGGTGACTTGAAACGATATGGCATCCATTATGATAGGAGTGGAAGGTCTAAGGGAACTGCCGAAGTTGTTTTCTCTCGGAGGGGTGATGCTGTAGCAGCTGTCAAGAGGTATAACAATGTGGAACTTGATGGGAAGCCTATGAAAATTGAGATAGTGGGTACAAACATCACAGCTCAAGGAGAACTTCCTCCTGTTCTCAATGGCGCTCCAAGAAAGCAGTTTGGAGGTCCCAGAGGTGGTGGAAGGGGTGGTGCGATGGGACGCCTACGTGGAGGTCGTGGCTTTGGTAGAGGCCGTGGCCGGGGAAGGGGCCGTGATGAAAAGGTTTCTGCAGAAGACCTGGATGCTGACTTAGACAAATATCACTCAGAAGCAATGCAGACAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_25949.p1 GENE.R_Transcript_25949~~R_Transcript_25949.p1 ORF type:complete len:240 (+),score=55.36,RRM_1|PF00076.18|1.4e-14,RRM_6|PF14259.2|1.1e-11,RRM_5|PF13893.2|3.2e-06,FoP_duplication|PF13865.2|1.6e+02,FoP_duplication|PF13865.2|2.6e-06 R_Transcript_25949:260-979(+)
MENRLNMSLDDLIKMNKSSSGRGGGRGRGRSGPGPSRRFANRAANRSAPYSMSKAPDTFWQHDMYANQGGGIGIGGGGGASSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVELDGKPMKIEIVGTNITAQGELPPVLNGAPRKQFGGPRGGGRGGAMGRLRGGRGFGRGRGRGRGRDEKVSAEDLDADLDKYHSEAMQTN*

Click here to download the sequence:
Link to NCBI Protein BLAST