Transcript Information: R_Transcript_259744.p2


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25296747489516
Replicate 30.13799239515754
Condition 2: 8 Hour
Replicate 10
Replicate 20.40411232243106
Replicate 30
Condition 3: 24 Hour
Replicate 10.41490013062116
Replicate 20
Replicate 30.13185364269215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_259744.p2 GENE.R_Transcript_259744~~R_Transcript_259744.p2 ORF type:3prime_partial len:166 (+),score=25.23,RVT_2|PF07727.10|1.5e-19 R_Transcript_259744:1182-1676(+)
ATGCCTGTGAATTCTCCCCCAGCCCAGTCGCCTATTGTGTCGTCCCCCAACCCGGTTCCTCCCATTCAGTCCGTGTCTAGTATGTTGCAGCCTGTCAATCACCATGCTATGCAGACCCGTGCCAAGTCAGGGATTGTCAAACCTCGTGTCTTGCTCTCCCTTAGTGCCCATTCTCATGAGGGTGCTCCAAGAACAGTTTCTCAAGCACTCAAAGATCCTCGTTGGAGGGAAGCTATGGCAGAAGAGTTTAATGCTTTTATTGCTATCAAGACTGGGACACTTGTACTGCGCAACAAATCTAAAAATTTGGTTCACTCTAAATGGAATTTTTCAATTAAATGTAATTCAGATGGTTCGGTGGAGCGATTCAAAGCCCGATTAGTGGCTAGAGGTGATCAGCAACATTCTGGTATTGATTTTCATTTTACGTTCAGTCCTGTTGTTAAGCCTACTACTGTCCGTATTGTGCTTGCCCTTGCTTTACCTTTTAGCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_259744.p2 GENE.R_Transcript_259744~~R_Transcript_259744.p2 ORF type:3prime_partial len:166 (+),score=25.23,RVT_2|PF07727.10|1.5e-19 R_Transcript_259744:1182-1676(+)
MPVNSPPAQSPIVSSPNPVPPIQSVSSMLQPVNHHAMQTRAKSGIVKPRVLLSLSAHSHEGAPRTVSQALKDPRWREAMAEEFNAFIAIKTGTLVLRNKSKNLVHSKWNFSIKCNSDGSVERFKARLVARGDQQHSGIDFHFTFSPVVKPTTVRIVLALALPFSW

Click here to download the sequence:
Link to NCBI Protein BLAST