Transcript Information: R_Transcript_259745.p2


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.13799239515754
Condition 2: 8 Hour
Replicate 10.14750521052557
Replicate 20.13470410747702
Replicate 30.21869410386008
Condition 3: 24 Hour
Replicate 10
Replicate 20.13286300536492
Replicate 30.13185364269215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_259745.p2 GENE.R_Transcript_259745~~R_Transcript_259745.p2 ORF type:3prime_partial len:166 (+),score=19.42,RVT_2|PF07727.10|4.3e-20 R_Transcript_259745:1182-1676(+)
ATGCCTGTGAATTCTCCCCCAGCCCAGTCGCCTATTGTGTCGTCCCCCAACCCGGTTCCTCCCATTCAGTCCGTGTCTAGTATGTTGCAGCCTGTCAATCACCATGCTATGCAGACCCGTGCCAAGTCAGGGATTGTCAAACCTCGTGTCTTGCTCTCCCTTAGTGCCCATTCTCATGAGGGTGCTCCAAGAACAGTTTCTCAAGCACTCAAAGATCCTCGTTGGAGGGAAGCTATGGCAGACGAGTTTAATGCTTTTATTGCTACTAAAACCTGGACACTTGTACCGAGCAATAAATCTAAAAATTTGGTCCACTGTAAATCGGATTTTTCTATTAAATATAACTCAGATGGTTCGGTGGAGCGATTCAAAGCCCGATTAGTGGCTAGAGGTGATCAGCAACATTCTGGTATTGATTTTCATTTTACGTTCAGTCCTGTTGTTAAGCCTACTACTGTCCGTATTGTGCTTGCCCTTGCTTTACCTTTTAGCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_259745.p2 GENE.R_Transcript_259745~~R_Transcript_259745.p2 ORF type:3prime_partial len:166 (+),score=19.42,RVT_2|PF07727.10|4.3e-20 R_Transcript_259745:1182-1676(+)
MPVNSPPAQSPIVSSPNPVPPIQSVSSMLQPVNHHAMQTRAKSGIVKPRVLLSLSAHSHEGAPRTVSQALKDPRWREAMADEFNAFIATKTWTLVPSNKSKNLVHCKSDFSIKYNSDGSVERFKARLVARGDQQHSGIDFHFTFSPVVKPTTVRIVLALALPFSW

Click here to download the sequence:
Link to NCBI Protein BLAST