Transcript Information: R_Transcript_259865.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78833386183171
Replicate 21.4648581685789
Replicate 30.76102118259643
Condition 2: 8 Hour
Replicate 11.0575290508777
Replicate 20.96575237187845
Replicate 30.6633478964261
Condition 3: 24 Hour
Replicate 10.83898963290613
Replicate 20.14654657070151
Replicate 31.0907494030015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_259865.p2 GENE.R_Transcript_259865~~R_Transcript_259865.p2 ORF type:complete len:301 (+),score=34.11,zf-RVT|PF13966.2|2.2e+03,zf-RVT|PF13966.2|1.1e-20,zf-RVT|PF13966.2|1.6e+04 R_Transcript_259865:2058-2960(+)
ATGTGCAGAAGTTTTCTATGGAGTAATAAGGAGGGGAATGCAAAAGGCCTGGTCCCAATAGCTTGGCAGAATGTTTGTGCACCAAAGGCTGAAAGGGGTCTGGGATTATTTGATATGCTGCACTGGAACTTAGCAGCTATGTGCAAATTAATTCATTCTATTGAAATCCAGCATGATTCAAGTTGGACTGAGTGGTGCAGGGCATACTATCTCAGGAATAGAAGCATTTGGCAAACTGAAAAGAAGCAAGGTACATCTTGGGTGTGGAGGAATTTAATTACAGTAAAGGATGCAATAGTAGAGAGATATGGGAATATTAATGCAGCAAAAGAAGTTATGTCAGCATGTTGCAAAGGTGACAAGTTCTATATTCAGAAGATGTACGATACATGGAGGAATAAAAGGAGTCGAATGGACTGGACAAAACTGGTGTGGTCATCTTGTGCAATGCCAAAGGCTAAATTTATCTCTTGGCTAGCTATGTATGACAGGCTTAAAACCAGAGATAGACTAAAGAAGATGGGAGTGATACAAGATGATCAGTGCTTATTATGTAAAGGACAAAGCGAGTCAAGTGCTCACTTATTTTTTTCATGCCCAGTGAGTGCTGAAATTTGGAAGCATTTACTCAGGTGGACTGGTGAAATAAGGAAGCCTTATAGCTTGAAGAAAGAGATCAAATGGTTTGTGCATAGAAGAAGGAATAAAACTATGATCCAGCATACCAGGCGATCACTATTAGTGCTTGCTATTGCTGAAATTTGGTATGAACGAAACCTCAGGCTGTTCCAAGTGACTTCAAGACCAGTTGAACATATAGTGAAGAGAATCCAGGTTCATTGTTGTATCAGAATTATGCAACATTATGGGCAAAAAGCGGATATTTTAAAGTGTTTAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_259865.p2 GENE.R_Transcript_259865~~R_Transcript_259865.p2 ORF type:complete len:301 (+),score=34.11,zf-RVT|PF13966.2|2.2e+03,zf-RVT|PF13966.2|1.1e-20,zf-RVT|PF13966.2|1.6e+04 R_Transcript_259865:2058-2960(+)
MCRSFLWSNKEGNAKGLVPIAWQNVCAPKAERGLGLFDMLHWNLAAMCKLIHSIEIQHDSSWTEWCRAYYLRNRSIWQTEKKQGTSWVWRNLITVKDAIVERYGNINAAKEVMSACCKGDKFYIQKMYDTWRNKRSRMDWTKLVWSSCAMPKAKFISWLAMYDRLKTRDRLKKMGVIQDDQCLLCKGQSESSAHLFFSCPVSAEIWKHLLRWTGEIRKPYSLKKEIKWFVHRRRNKTMIQHTRRSLLVLAIAEIWYERNLRLFQVTSRPVEHIVKRIQVHCCIRIMQHYGQKADILKCLA*

Click here to download the sequence:
Link to NCBI Protein BLAST