Transcript Information: R_Transcript_259866.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2.7E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62842745071019
Replicate 20.19714836071641
Replicate 30.46602126564942
Condition 2: 8 Hour
Replicate 10.22991422485676
Replicate 20.24495488714914
Replicate 30.51131297522217
Condition 3: 24 Hour
Replicate 10.3233493975733
Replicate 20.10354581638769
Replicate 30.41103670773516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_259866.p1 GENE.R_Transcript_259866~~R_Transcript_259866.p1 ORF type:5prime_partial len:639 (+),score=134.41,RVT_1|PF00078.23|2.1e-42 R_Transcript_259866:3-1919(+)
GATTTCAATGTGGTAATGCAGGATAAAGAAAGGGATGCTAAGCATTTGTGTGATGCCAAAGATAGTGAAGAATTCAAGAATTGTGTGGGTGTATGTAAACTTCATGACATGCCTTTTCAAGGGGAATATTTCACATGGTGTAACAAGCATAATGATGATTCAAGGGTGTATTGTAAGTTGGATAGGGTTATGGCAAATGAGGTGTGGTTGCTGGGGAACATAACTACATCAGTTGTGTTTCATCCATCAGGCATTTCTGACCATAGCCCTAGTGTGGTGGAATGTGGTGGGAGAAGGGATAATTTTAGAATAACATTCAAATTTTTGAATTTATGGGTGGAAGACAGGGAGTTTAAGGGGATTGTGAGAAAGAGGTGGGAGGAAAAAATTCATGGGTGCAGTATGTTTGTGCTGGTAAAGAAACTACAACATCTGAAGAAGGATCTTAAGGCTCTTCATACTAGGGGATATAGCAACTTTCATAAGAAGGTGGAAGAGGCTAGGGAGGAGTTATATGAAGCACAAAGGTTGTTGGCTTTGAATGTAAGAGATGAGGAGTTGATTTCAAAGGAAACGATGGCAATAGAGAAATATTTGAAGTTGGGGAAAATTGAGGAAAAAATCCTATATCAGAAAGTGAAGAATGATAAGATAAAATTAGGGGATGGAAATAATAAGTATTTCCATGCAAAATTTAAAGAGGGTATTAATAAAGCAGCAATCAGGAAAATACAGAACCAGGATGGAGTTTGGGTTATAGAGGAGAAGGATATTGCTGATATTTTCATAAAATTCTATACTGACTTGTTTGGGAAGCCTTCTAGGGGAGCTGGACTGGATTTACTTTTTTTGGCAGAGGGGCCTGTTCTTAATAGGGAGCAAAAGGAGAGGACGAACATGGAATTCACTGATGATGAAATTAAGGCAGCTGTGTTTGAAATTCCCAACAACAAAGCTCCAGGACTTGATGGCTACAATTCTTTGTTCTTCAAAGAAACTTGGGAGATTGTGGGTATGGATGTATGCAAAGCTGTGAAGGAATTCTTCAGGAAAGGAAAAATGTTGAAATCTCTTAATTCAACTGCCGTTAGTTTGATACCAAAAGTCCCTAATCCCAATACTCCAGCTGAATTCAGACTTATAGCTTGTTGTAATGTTATCTATAAGACCATTACTACTAAGAGAATCAAAGAGGTGGCTAGAGAGTTAATAGGGAAAGAGCAGTCTGCATTCTTATCTGGGAGGTCCATTGCTAATAACATTTTGATCACTCATAATCTGGTGCATGCTTATGAAAGGAAGAACATGTCTCCTAGGTCTATGGTGAAAATAGACATTAGGAAGGCATATGATACTGTCTCTTGGAATTTCTTAATTAAGGCATTGCTTTACTTTGGTTTTCCTGAAGTGATGGTGGAGAAAATAATGACATGTGTTGGTACAGCACAATTTTCAATCAATCTTAATGGTGGTATGCAGGGGTTTTTCAAAGGTGGCTGTGGATTGAGGCAAGGTGATCCTATGTCACCTTACCTATTTGTGCTGTGCATGGAAATATTATCTAGAATGCTTAGGAATTGCTTTGAGGATAAGCAGTTCAAACATCATCCTAAGTGTAAAAAAGTGAAGCTTAACCATGTCATATTTGCTTATGACATGCTACTTTTTGCTAAAGGGGAGAAGGAATCAGTATTAGTGTTGCAGGAAACTTTTAACAGGTTTTCAGCAATGTCAGGCATGTTTGCTAATAAAGAGAAGAGTTGTATTTACTTTTGTGGAGTGGATCAAGGGAAAAAGAATGATATTCTGGCTTGTACTGGCTTTAGTGAAGGGAAACTTCCTTTTAGATACCTGGGTGTACCCCTTGCTGCATCCAGGCTAACTAAAAGACTATCAGCCTTTGTTGGAAAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_259866.p1 GENE.R_Transcript_259866~~R_Transcript_259866.p1 ORF type:5prime_partial len:639 (+),score=134.41,RVT_1|PF00078.23|2.1e-42 R_Transcript_259866:3-1919(+)
DFNVVMQDKERDAKHLCDAKDSEEFKNCVGVCKLHDMPFQGEYFTWCNKHNDDSRVYCKLDRVMANEVWLLGNITTSVVFHPSGISDHSPSVVECGGRRDNFRITFKFLNLWVEDREFKGIVRKRWEEKIHGCSMFVLVKKLQHLKKDLKALHTRGYSNFHKKVEEAREELYEAQRLLALNVRDEELISKETMAIEKYLKLGKIEEKILYQKVKNDKIKLGDGNNKYFHAKFKEGINKAAIRKIQNQDGVWVIEEKDIADIFIKFYTDLFGKPSRGAGLDLLFLAEGPVLNREQKERTNMEFTDDEIKAAVFEIPNNKAPGLDGYNSLFFKETWEIVGMDVCKAVKEFFRKGKMLKSLNSTAVSLIPKVPNPNTPAEFRLIACCNVIYKTITTKRIKEVARELIGKEQSAFLSGRSIANNILITHNLVHAYERKNMSPRSMVKIDIRKAYDTVSWNFLIKALLYFGFPEVMVEKIMTCVGTAQFSINLNGGMQGFFKGGCGLRQGDPMSPYLFVLCMEILSRMLRNCFEDKQFKHHPKCKKVKLNHVIFAYDMLLFAKGEKESVLVLQETFNRFSAMSGMFANKEKSCIYFCGVDQGKKNDILACTGFSEGKLPFRYLGVPLAASRLTKRLSAFVGKN*

Click here to download the sequence:
Link to NCBI Protein BLAST